IZTECH Research Centers Collection / İYTE Araştırma Merkezleri Koleksiyonu

Permanent URI for this collectionhttps://hdl.handle.net/11147/2636

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Department: search.filters.department.İzmir Institute of Technology. BioengineeringScopus Q: search.filters.scopusQuartile.Q4

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  • Article
    Citation - Scopus: 1
    Prognostic Significance of the Igvh Mutation Status and Immunohistochemical Analysis of Zap70 and Cd38 in Bone Marrow Biopsies in Chronic Lymphocytic Leukemia
    (Türkiye Klinikleri Journal of Medical Sciences, 2014) Kahraman Çetin, Nesibe; Kaçar Döger, Füruzan; Kurtgöz, Serkan Erkan; Rusçuklu, Dane; Yavaşoğlu, İrfan
    Objective: Chronic lymphocytic leukemia (CLL) is one of the most common leukemia type among adults in the industrialized countries. Due to the nature of CLL, it is important to recognize patients with a more rapid course of disease. The goal of our study was to study ZAP70 and CD38 antibodies along with immunglobulin heavy chain variable region (IgVH) mutation status, which have been associated with rapid progression and aggressive clinical course in CLL, and to correlate the expression of these molecules with patterns of bone marrow infiltration. Material and Methods: We included 84 bone marrow biopsy samples into the study to determine ZAP70 and CD38 status using immunohistochemistry. Expression patterns for both antibodies were then correlated with the bone marrow infiltration patterns. We also analyzed IgVH mutations in 20 patients using DNA obtained from paraffin-embedded formalin-fixed bone marrow biopsies. These findings were then correlated with immunohistochemical results. Results: We identified a positive correlation between the expression patterns of ZAP70 and CD38, factors that were previously identified as poor prognostic factors (p<0.001). However, there was no correlation between these two markers and IgVH mutation status (p=1.000 and p=0.931). In addition, we showed a statistically significant positive correlation with ZAP70 immunostaining, and the necessity for an early intervention (p=0.046). ZAP70 and CD38 expressions were statistically significantly correlated with the diffuse pattern infiltration of bone marrow (p<0.001 and p<0.001, respectively). Conclusion: Despite small number of our patients, the findings of our study suggested that ZAP70 and CD38 expression patterns as well as IgVH mutation status might be helpful to determine the course of the disease, and the risk of progression. Particularly ZAP70 immunopositive patients appear to have a faster disease progression, and may require earlier intervention and a closer follow up.
  • Article
    Citation - WoS: 20
    Citation - Scopus: 20
    Screening Virulence Properties of Staphylococci Isolated From Meat and Meat Products
    (B W K Public Relations, 2009) Sudağıdan, Mert; Aydın, A.
    Virulence properties (biofilm formation, antibiotic susceptibility, production of extracellular enzymes and the presence of toxin genes) of staphylococci isolated from various meat and meat products were investigated. 22 Staphylococcus spp. (S. aureus n = 9, S. haemolytlcus n = 4, S. cohnii n = 3, S. saprophytics n = 3, S. hominis n = 1, S. simulans n = 1 and S. warneri n = 1) were isolated from 120 meat and meat product samples. 10 strains were biofilmformers. Although none of the strains was resistant to vancomycin, oxacillin, teicoplanin, ofloxacin and gentamicin, 8 strains were found to be resistant to penicillin and one strain was found to be resistant to erythromycin. In addition, all strains were negative for the mecA PCR. 8 strains showed lipolytic activity against Tween 80,10 strains against Tween 20, and 18 strains against tributyrin. Moreover, 9 strains showed proteolytic activity against casein, 11 strains against milk and 17 strains against skim milk containing media. Mostly S. aureus strains showed positive results for icaA-SA, nuc, geh, sspA, sspB, aur, serine protease gene, hla, hlb, set1, and etb. However, 7 of coagulase-negative staphylococci strains were found to carry see gene. As both prevalence and concentration of this bacterium were low, and no isolate contained all virulence factors, it is concluded that common hygiene and process control measures should be sufficient to control meatborne staphylococcal intoxication.