Scopus İndeksli Yayınlar Koleksiyonu / Scopus Indexed Publications Collection
Permanent URI for this collectionhttps://hdl.handle.net/11147/7148
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Article Citation - WoS: 38Citation - Scopus: 36Structural Studies of Geosmin Synthase, a Bifunctional Sesquiterpene Synthase With ?? Domain Architecture That Catalyzes a Unique Cyclization-Fragmentation Reaction Sequence(American Chemical Society, 2015) Harris, Golda G.; Lombardi, Patrick M.; Pemberton, Travis A.; Matsui, Tsutomu; Weiss, Thomas M.; Cole, Kathryn E.; Köksal, Mustafa; Murphy, Frank V.; Vedula, L. Sangeetha; Chou, Wayne K. W.; Cane, David E.; Christianson, David W.Geosmin synthase from Streptomyces coelicolor (ScGS) catalyzes an unusual, metal-dependent terpenoid cyclization and fragmentation reaction sequence. Two distinct active sites are required for catalysis: the N-terminal domain catalyzes the ionization and cyclization of farnesyl diphosphate to form germacradienol and inorganic pyrophosphate (PPi), and the C-terminal domain catalyzes the protonation, cyclization, and fragmentation of germacradienol to form geosmin and acetone through a retro-Prins reaction. A unique αα domain architecture is predicted for ScGS based on amino acid sequence: each domain contains the metal-binding motifs typical of a class I terpenoid cyclase, and each domain requires Mg2+ for catalysis. Here, we report the X-ray crystal structure of the unliganded N-terminal domain of ScGS and the structure of its complex with three Mg2+ ions and alendronate. These structures highlight conformational changes required for active site closure and catalysis. Although neither full-length ScGS nor constructs of the C-terminal domain could be crystallized, homology models of the C-terminal domain were constructed on the basis of 36% sequence identity with the N-terminal domain. Small-angle X-ray scattering experiments yield low-resolution molecular envelopes into which the N-terminal domain crystal structure and the C-terminal domain homology model were fit, suggesting possible αα domain architectures as frameworks for bifunctional catalysis. © 2015 American Chemical Society.Article Citation - WoS: 30Citation - Scopus: 30Glycidyl-Methacry Late-Based Electrospun Mats and Catalytic Silver Nanoparticles(John Wiley and Sons Inc., 2008) Demir, Mustafa Muammer; Uğur, Gökçe; Gülgün, Mehmet A.; Menceloğlu, Yusuf Z.P(AN-GMA) and PGMA fibers coated with monodisperse silver nanoparticles have been prepared by a combination of electrospinning and electroless plating. The morphology of the electrospun fibers remains unchanged after surface hydrazination. Oxidation of hydrazine in an ammoniacal solution of AgNO 3 reduces and deposits silver atoms along the fiber surface, which then coalesce to Ag particles. The size of the silver nanoparticles is varied between 20-60 nm. Since the density of the active sites for silver reduction is lower in P(AN-GMA), a smaller particle size could be obtained. The catalytic activity of the silver nanoparticles has been confirmed.