Scopus İndeksli Yayınlar Koleksiyonu / Scopus Indexed Publications Collection
Permanent URI for this collectionhttps://hdl.handle.net/11147/7148
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Article Citation - WoS: 5Citation - Scopus: 7Characterization and Separation Behavior of Multi-Layers in Aluminum-Rich Waste Pharmaceutical Blisters(Springer, 2023) Çapkın, İrem Yaren; Gökelma, MertolAl-rich waste pharmaceutical blisters (WPBs) have a multi-layer structure that contains aluminum and polymer-based fractions. Although the aluminum mass in WPBs is less than typical aluminum packaging products such as beverage cans, establishing a feasible recycling procedure is possible by separating the fractions to recover both metal and plastic. Hydrometallurgical methods are mostly preferred for the separation of aluminum and plastic in multi-layered structures. This work reports the characterization of Al-rich WPBs and the separation behavior of aluminum and plastic layers. The effects of hydrochloric acid, acetic acid, formic acid, sulfuric acid, ethanol, acetone, and organic solvent (benzene–ethanol–water) on the separation behavior of layers were studied at different temperatures. Furthermore, the recycling yield of the aluminum fraction was experimentally assessed. © 2023, The Minerals, Metals & Materials Society.Article Citation - WoS: 31Citation - Scopus: 38Liquefaction of Waste Hazelnut Shell by Using Sub- and Supercritical Solvents as a Reaction Medium(Elsevier, 2019) Demirkaya, Emre; Dal, Orkan; Yüksel, AslıDirect thermochemical biomass degradation to obtain bio-oil by using organic solvents is not a new process type, and it has some advantages over hydrothermal liquefaction technique. However, up to our best knowledge, in this study, hazelnut shell decomposition by using ethanol, acetone and their mixtures at sub/supercritical conditions was studied for the first time in literature. Experiments were carried out between 220-300 degrees C, at three different reaction times (30, 60 and 90 min) for five different solvent ratios. Highest solid conversion achieved at 300 degrees C by using pure ethanol was 64.2%, whereas highest bio-oil yield was found as 44.2% at 300 degrees C with 50/50 (EtOH/Ac: v/v). Ethanol and acetone showed different characteristics during the reactions and their effects on the conversion and bio-oil yield were discussed. Statistical analysis showed that time, temperature, ratio and synergy between temperature-time were affecting parameters for the conversion and bio-oil yield. (C) 2019 Elsevier B.V. All rights reserved.Article Citation - WoS: 21Citation - Scopus: 23Mass Spectrometry of Intact Proteins Reveals +98 U Chemical Artifacts Following Precipitation in Acetone(American Chemical Society, 2017) Güray, Melda Zeynep; Zheng, Shi; Doucette, Alan A.Protein precipitation in acetone is frequently employed ahead of mass spectrometry for sample preconcentration and purification. Unfortunately, acetone is not chemically inert; mass artifacts have previously been observed on glycine-containing peptides when exposed to acetone under acidic conditions. We herein report a distinct chemical modification occurring at the level of intact proteins when incubated in acetone. This artifact manifests as one or more satellite peaks in the MS spectrum of intact protein, spaced 98 u above the mass of the unmodified protein. Other artifacts (+84, +112 u) also appear upon incubation of proteins or peptides in acetone. The reaction is pH-sensitive, being suppressed when proteins are exposed to acetone under acidic conditions. The +98 u artifact is speculated to originate through an intermediate product of aldol condensation of acetone to form diacetone alcohol and mesityl oxide. A +98 u product could originate from nucleophilic attack on mesityl oxide or through condensation with diacetone alcohol. Given the extent of modification possible upon exposure of proteins to acetone, particularly following overnight solvent exposure or incubation at room temperature, an awareness of the variables influencing this novel modification is valued by proteomics researchers who employ acetone precipitation for protein purification.Article Citation - WoS: 38Citation - Scopus: 36Structural Studies of Geosmin Synthase, a Bifunctional Sesquiterpene Synthase With ?? Domain Architecture That Catalyzes a Unique Cyclization-Fragmentation Reaction Sequence(American Chemical Society, 2015) Harris, Golda G.; Lombardi, Patrick M.; Pemberton, Travis A.; Matsui, Tsutomu; Weiss, Thomas M.; Cole, Kathryn E.; Köksal, Mustafa; Murphy, Frank V.; Vedula, L. Sangeetha; Chou, Wayne K. W.; Cane, David E.; Christianson, David W.Geosmin synthase from Streptomyces coelicolor (ScGS) catalyzes an unusual, metal-dependent terpenoid cyclization and fragmentation reaction sequence. Two distinct active sites are required for catalysis: the N-terminal domain catalyzes the ionization and cyclization of farnesyl diphosphate to form germacradienol and inorganic pyrophosphate (PPi), and the C-terminal domain catalyzes the protonation, cyclization, and fragmentation of germacradienol to form geosmin and acetone through a retro-Prins reaction. A unique αα domain architecture is predicted for ScGS based on amino acid sequence: each domain contains the metal-binding motifs typical of a class I terpenoid cyclase, and each domain requires Mg2+ for catalysis. Here, we report the X-ray crystal structure of the unliganded N-terminal domain of ScGS and the structure of its complex with three Mg2+ ions and alendronate. These structures highlight conformational changes required for active site closure and catalysis. Although neither full-length ScGS nor constructs of the C-terminal domain could be crystallized, homology models of the C-terminal domain were constructed on the basis of 36% sequence identity with the N-terminal domain. Small-angle X-ray scattering experiments yield low-resolution molecular envelopes into which the N-terminal domain crystal structure and the C-terminal domain homology model were fit, suggesting possible αα domain architectures as frameworks for bifunctional catalysis. © 2015 American Chemical Society.