Scopus İndeksli Yayınlar Koleksiyonu / Scopus Indexed Publications Collection
Permanent URI for this collectionhttps://hdl.handle.net/11147/7148
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Article Citation - WoS: 26Citation - Scopus: 27Dopamine-Conjugated Bovine Serum Albumin Nanoparticles Containing Ph-Responsive Catechol-V(iii) Coordination for in Vitro and in Vivo Drug Delivery(Amer Chemical Soc, 2023) Argıtekin, Eda; Ersöz-Gülseven, Esra; Çakan-Akdoğan, Gülçin; Akdoğan, YaşarV(III) instead of commonly used Fe(III) provided a richtris-catechol-metalcoordination at pH 7.4, which is important for slow drug release atphysiological pH. Bovine serum albumin (BSA) functionalized with catechol-containingdopamine (D) and cross-linked using tris-catechol-V(III) coordinationyielded pH-responsive compact D-BSA NPs (253 nm). However, conversionto bis- and/or mono-catechol-V(III) complexes in an acidic mediumresulted in degradation of NPs and rapid release of doxorubicin (DOX).It was shown that D-BSA NPs entered cancerous MCF-7 cells (66%) moreefficiently than non-cancerous HEK293T (33%) in 3 h. Also, DOX-loadedNPs reduced cell viability of MCF-7 by 75% and induced apoptosis ina majority of cells after 24 h. Biodegradability and lack of hemolyticactivity were shown in vitro, whereas a lack of toxicity was shownin histological sections of zebrafish. Furthermore, 30% of circulatingtumor cells in vasculature in 24 h were killed by DOX-loaded NPs shownwith the zebrafish CTC xenograft model.Article Citation - WoS: 13Citation - Scopus: 14Synthesis of Albumin Nanoparticles in a Water-Miscible Ionic Liquid System, and Their Applications for Chlorambucil Delivery To Cancer Cells(Elsevier, 2022) Akdoğan, Yaşar; Sözer, Sümeyra Çiğdem; Akyol, Cansu; Başol, Merve; Karakoyun, Çiğdem; Çakan Akdoğan, GülçinSerum albumin has been a preferred protein to generate biodegradable and non-toxic nanoparticles (NPs) for drug delivery applications. Different methods applied for the preparation of serum albumin NPs mostly used organic solvents. Here, we prepared serum albumin NPs in an ionic liquid (IL) system. ILs are considered to be green and designer solvents with unique properties that can replace organic solvents in the synthesis of albumin NPs. Bovine serum albumin (BSA) proteins dissolved in water were transformed into BSA NPs in a water/ Triton™X (TX-100), 1-butanol/1-butyl-3-methylimidazolium trifluoromethanesulfonate (BmimCF3SO3) microemulsion-like system by using a high-speed homogenizer and crosslinker glutaraldehyde. The obtained BSA NPs have been used in drug loading and release studies with a hydrophobic anticancer drug chlorambucil (Chl). Drug loading increased as increasing the ratio of Chl incubated with BSA NPs. Monitoring the drug release by UV–Vis spectroscopy revealed a burst release at first 4 h, but two-thirds of drugs stayed with NPs upon diffusion method. On the other hand, cellular uptake of Chl loaded BSA NPs caused a significant MCF7 breast cancer cell death, whereas free Chl and unloaded BSA NPs did not have a significant effect on the cell viability. Furthermore, in vivo toxicity assessment of BSA NPs obtained in the IL system was conducted in the zebrafish animal model. It showed that zebrafish body is able to eliminate BSA NPs without any toxic side effects and encapsulation of Chl into NPs reduced the toxicity of free Chl. In summary, we showed that BSA NPs with size smaller than 200 nm could be prepared in BmimCF3SO3 mediated system. They can be used for Chl loading (up to 6.9 wt%) with a sustainable release and they induce significant cell death in Chl sensitive cancer cells up to 45% in 24 h. These results indicate that BSA NPs could be prepared alternatively in IL systems and used in drug delivery studies.Article Citation - WoS: 18Citation - Scopus: 20A Simple Desolvation Method for Production of Cationic Albumin Nanoparticles With Improved Drug Loading and Cell Uptake(Editions de Sante, 2020) Sözer, Sümeyra Çiğdem; Özmen Egesoy, Tuğçe; Başol, Merve; Çakan Akdoğan, Gülçin; Akdoğan, YaşarThe transport protein albumin has been used as a drug nanocarrier for a long time due to its versatility. Albumin is negatively charged at physiological conditions limiting its anionic drug loading capacity. However, loading of anionic drugs in the albumin nanoparticles (NPs), can be facilitated by albumin cationization. Here, we postulate a simple desolvation method for preparation of cationic albumin NPs with improved anionic drug loading. First, bovine serum albumin was cationized with ethylenediamine. Next, salicylic acid (SA) was added to the cationic bovine serum albumin (cBSA) solution prior to the desolvation. Among different desolvating agents tested, acetonitrile allowed the highest nanoparticle formation yield. The SEM analyses showed that the average size of cBSA NPs decreased from ~200 nm to ~100 nm upon SA loading. Moreover, the drug loading capacity of cBSA NPs was found to increase ~2 fold, and drug release was slower compared to BSA NPs. Finally, a significant increase in cellular uptake of cBSA NPs compared to that of native BSA NPs showed the potential for improved drug delivery. © 2020 Elsevier B.V.Article Citation - WoS: 33Citation - Scopus: 40Preparation of Albumin Nanoparticles in Water-In Liquid Microemulsions(Elsevier Ltd., 2019) Demirkurt, Begüm; Çakan Akdoğan, Gülçin; Akdoğan, YaşarIonic liquids (Its) with a variety of properties have been considered a unique class of solvents. Using ILs in microemulsions as oil substitutes provides environmentally benign media for various applications including nanoparticle synthesis. Here, bovine serum albumin nanoparticles (BSA NPs) widely used in drug delivery studies were prepared in nano-sized water droplets of water-in-IL (W/IL) microemulsion systems. A hydrophobic IL of 1-butyl-3-methylimidazolium hexafluorophosphate (BmimPF(6)) was used as oil component in place of oils (castor oil, olive oil, etc.) and/or conventional organic solvents (cyclohexane, dichloromethane, etc.) in an emulsification method. In order to obtain spherical BSA NPs, high speed homogenizer treatment was applied followed by glutaraldehyde addition. Effects of glutaraldehyde, speed of homogenizer, type of surfactants and compositional fractions of the microemulsion components on the formation of water droplets and/or preparation of BSA NPs were studied using FTIR, EPR, DLS, and SEM techniques. Optimization of these preparation parameters showed that 3 wt% of BSA in a water/Tween 20/BmimPF(6) microemulsion with 20:50:30 wt% yielded similar to 100 nm average sized BSA NPs based on the SEM analysis. Although, water droplet size strongly depends on the water content, BSA nanoparticle size did not show a significant dependency on the water content. On the other hand, surfactant/IL weight ratio is more crucial for obtaining more uniformly size distributed albumin nanoparticles. A significant cellular uptake of BSA NPs prepared in IL based microemulsions with high cell viability showed the potential of this technique in preparation of albumin nanoparticles that can be used also in drug delivery studies. (C) 2019 Elsevier B.V. All rights reserved.Article Citation - WoS: 13Citation - Scopus: 16Experimental Modeling of Silicate-Based Geothermal Deposits(Elsevier Ltd., 2017) Çelik, Aslı; Topçu, Gökhan; Baba, Alper; Akdoğan, Yaşar; Şentürk, Ufuk; Demir, Mustafa MuammerScaling by metal silicates represents a major obstacle for geothermal systems. A composition that enables the fabrication of artificial deposits is necessary for the rapid testing of potential inhibitors. In this work, artificial deposits were synthesized by employing experimental conditions similar to those in the Tuzla Geothermal Field in Turkey. Although refluxing enabled the formation of a precipitate that was similar to naturally formed deposits in color and texture, their elemental composition and morphology showed a mismatch. An autoclave enabled the production of a precipitate that more closely resembled naturally formed deposits in color, texture, elemental composition, and structure.Article Citation - WoS: 66Citation - Scopus: 71Signature of an Aggregation-Prone Conformation of Tau(Nature Publishing Group, 2017) Eschmann, Neil A.; Georgieva, Elka R.; Ganguly, Pritam; Borbat, Peter P.; Rappaport, Maxime D.; Akdoğan, Yaşar; Freed, Jack H.; Shea, Joan-Emma; Han, SongiThe self-assembly of the microtubule associated tau protein into fibrillar cell inclusions is linked to a number of devastating neurodegenerative disorders collectively known as tauopathies. The mechanism by which tau self-assembles into pathological entities is a matter of much debate, largely due to the lack of direct experimental insights into the earliest stages of aggregation. We present pulsed double electron-electron resonance measurements of two key fibril-forming regions of tau, PHF6 and PHF6∗, in transient as aggregation happens. By monitoring the end-to-end distance distribution of these segments as a function of aggregation time, we show that the PHF6 (∗) regions dramatically extend to distances commensurate with extended β-strand structures within the earliest stages of aggregation, well before fibril formation. Combined with simulations, our experiments show that the extended β-strand conformational state of PHF6 (∗) is readily populated under aggregating conditions, constituting a defining signature of aggregation-prone tau, and as such, a possible target for therapeutic interventions.Article Citation - WoS: 58Citation - Scopus: 86Intrinsic Surface-Drying Properties of Bioadhesive Proteins(John Wiley and Sons Inc., 2014) Akdoğan, Yaşar; Wei, Wei; Huang, Kuo-Ying; Kageyama, Yoshiyuki; Danner, Eric W.; Miller, Dusty R.; Martinez Rodriguez, Nadine R.; Waite, J. Herbert; Han, SongiSessile marine mussels must "dry" underwater surfaces before adhering to them. Synthetic adhesives have yet to overcome this fundamental challenge. Previous studies of bioinspired adhesion have largely been performed under applied compressive forces, but such studies are poor predictors of the ability of an adhesive to spontaneously penetrate surface hydration layers. In a force-free approach to measuring molecular-level interaction through surface-water diffusivity, different mussel foot proteins were found to have different abilities to evict hydration layers from surfaces - a necessary step for adsorption and adhesion. It was anticipated that DOPA would mediate dehydration owing to its efficacy in bioinspired wet adhesion. Instead, hydrophobic side chains were found to be a critical component for protein-surface intimacy. This direct measurement of interfacial water dynamics during force-free adsorptive interactions at solid surfaces offers guidance for the engineering of wet adhesives and coatings. Home and dry underwater: Repulsive hydration forces hinder wet adhesion in the absence of applied external forces. The direct measurement of hydration-water dynamics by NMR relaxometry at 10 GHz revealed that the most hydrophobic mussel adhesive protein, and not the most enriched with 3,4-dihydroxyphenylalanine, effectively dries the surface and overcomes repulsive hydration forces to adsorb spontaneously to surfaces in preparation for adhesion.