Scopus İndeksli Yayınlar Koleksiyonu / Scopus Indexed Publications Collection

Permanent URI for this collectionhttps://hdl.handle.net/11147/7148

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  • Conference Object
    Citation - Scopus: 1
    Depth Camera Calibration Using 4 Spheres on Tetrahedron Corners
    (IEEE, 2022) Tunçer, Esra; Gümüştekin, Şevket
    In this study, a system including 4 depth cameras (Kinect v1) was constructed for 3-dimensional reconstruction of an object. As with all cameras, the calibration parameters of the cameras used must be known in order to transform from image coordinates to world coordinates in depth cameras. Contrary to the studies that use flat calibration objects such as checkerboard and infrared images, which are frequently encountered in the literature, in this study, only depth images of the cameras were used to find intrinsic and extrinsic parameters of a depth camera. For the calibration process, a new tetrahedron calibration object with 4 equiradius spheres was designed, the sphere centers were determined in the world and image coordinates, and the projection matrix method was applied. The minimum number of matching points required by the original projection matrix method was reduced from 6 to 4 with the help of depth information. A new calibration object and method was developed to provide successful 3-dimensional reconstruction results of 4 depth cameras with the use of only 4 matching points and can be used in all types of depth cameras.
  • Article
    Citation - WoS: 11
    Citation - Scopus: 11
    Molecular Dynamics Simulations of Duodenal Self Assembly in the Presence of Different Fatty Acids
    (Elsevier, 2022) Tunçer, Esra; Bayramoğlu, Beste
    A comprehensive understanding of dietary mixed micelle formation in the presence of lipid digestion products is crucial for an effective design of nutraceutical delivery systems. This study aimed to investigate the duodenal self-assembly of bile lipids and fatty acids (FA) with different characteristics via coarse-grained molecular dynamics (MD) simulations. The results show that increase in FA chain length and unsaturation degree lead to micelles with lower/higher fractions of FAs/bile salts (BS), lower core and surface packing densities, decreased ordering of lipid tails, thus more fluid internal structures. Our findings provide molecular insight into the instability of intestinal colloidal structures composed of long unsaturated FAs. We show the correlation between FA unsaturation degree and lipid packing density is a significant factor in determining the intermicellar BS concentrations. Overall, this study advances the knowledge in the field by establishing a more integral relationship between the FA characteristics and micelle structural properties over a wider range of FA types through MD simulations.