Scopus İndeksli Yayınlar Koleksiyonu / Scopus Indexed Publications Collection
Permanent URI for this collectionhttps://hdl.handle.net/11147/7148
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Article Can Fish Kills in Izmir Bay Be Explained With Satellite Image Analysis(Osman Orhan, 2025) Elçi, Sebnem; Erdem, Ahmet Adnan; Şekerci, HalilMotivated by a significant environmental crisis that emerged, where large numbers of dead fish washed ashore in İzmir Bay in the summer of 2024, this study aims to analyze the spatial and temporal dynamics of water quality in the inner bay prior to this incidence. By calculating indices such as NDCI, SABI, and UWQV, and correlating them with climatic data (air temperature, wind speed and relative humidity), this research seeks to document the occurrence and drivers of algal blooms in the bay using Landsat 8 and Sentinel-2 satellite data from 2017 to 2025. This is the first comprehensive study conducted for İzmir Bay that investigates the relationships between water quality indices and climatic variables. It also incorporates aerial analysis of the inner bay to provide a broader spatial perspective. A customized code using Python is developed for this study to independently download and analyze raw satellite data with respect to defined corrections/masks. The results of eight years of analysis indicated that critical conditions arise every summer with air temperatures reaching 40 degrees in the study area. Estimated aerial averaged NDCI index and Chl-a concentration values show a strong positive correlation with air temperature, particularly in the Spearman’s rank correlation (rs = 0.67 and 0.62 respectively), indicating a significant relationship between these parameters. Aerial distribution of the indices for the selected critical dates also revealed a significant increase in estimated Chl-a levels during the summer months, specifically in the regions determined from the risk maps produced as a result of this study. The areas with the greatest vulnerability coincide where Poligon, Ilıca streams in the south and Bostanlı and Çiğli streams in the north discharging into the bay. It is recommended that any planned external intervention methods for managing algal blooms should start with these highly vulnerable areas as presented by this study.Article Biquandle Power Brackets of Oriented Links(Tubitak Scientific & Technological Research Council Turkey, 2025) Gügümcü, Neslihan; Nelson, SamIn this paper, we introduce biquandle power brackets, an infinite family of invariants of oriented links containing the classical skein invariants and the quandle and biquandle 2-cocycle invariants as special cases. Biquandle power brackets are generalizations of biquandle brackets in which the values of Kauffman states also depend on the biquandle colors they admit. We provide example computations and discuss the relationship between these new invariants and the previous cases.Article Experimental Study of Evolution of Breach Resulting From Piping at Upper Part of Earth-Fill Dam(Turkish Chamber Civil Engineers, 2025) Guney, Mehmet Sukru; Tayfur, Gokmen; Bor, Asli; Okan, Merve; Dumlu, Emre; Aklık, PelinPiping and overtopping are the most important causes of earth-fill dam failure. Such dams may erode under seepage, causing a reduction in the structural strength. The aim of this study was to investigate the temporal evolution of the breach and flow rate from the breach resulting from the piping in earth-fill dams. The experiments were carried out at Hydraulics Laboratory of Civil Engineering Department of İzmir University of Economics. The dam was constructed by using a mixture consisting of 85 % sand and 15 % fine (low plasticity clay). In the first scenario a circular tunnel with a diameter of 2 cm was created along the centreline at 6 cm below the dam crest whereas in the second one it was located at the upper edge. Six cameras at different locations recorded the evolution of the progress of the breach formation. The pump flow rate was measured by magnetic flow meter, and the continuity equation was used to calculate the flow rate values from the breach. The time-varied values of the total breach areas were determined using the Gauss Area formula. The image processing method was also applied in the determination of the breach areas. The time-dependent changes of water depth in the channel were also recorded. The obtained experimental findings are presented and commented, together with the universal dimensionless curves. The failure of the dams occurred mainly because of the head cut erosion developed from downstream to upstream. When breaching started, the orifice flow was converted to open channel flow where breach bottom behaved like a broad crested weir. In the second scenario, the rigid lateral side considerably influenced the flow rate and the development of the breach. The peak flow rate corresponding to the first scenario was found approximately 2.3 times greater than that of the second one. The maximum values of all the breach parameters were reached earlier in the case of the seepage along the centerline. The ratios between the values corresponding to the first and the second scenarios were found as 3.25 and 1.75 for maximum breach areas at downstream and at upstream sides, respectively. These ratios were 2.44 and 1.37 for the average breach widths at downstream and upstream sides, respectively. A very good agreement was found between the area values obtained from Gauss area method and image processing technique, in both scenarios. This fact demonstrated that either of these two approaches can be used to determine the time-dependent breach areas. These experimental findings provide the opportunities for the calibration and validation of the numerical models used in the relevant numerical investigations. This study also offers guidance for the strategies concerning emergency action plans related to the failure of homogeneous earth-fill dams when the piping starts at upper part of the homogeneous earth-fill dams.Article Kentlerin Depreme Dirençliliğinin Bina Bazlı Bölgesel Risk Dağılımı Yöntemi İle İncelenmesi: İzmit Kenti Örneği(Afet ve Acil Durum Yonetimi Baskanligi, 2024) Kurt, Deniz Gerçek; Guven, Ismaıl Talıh; Erdogan, HakanTürkiye, yıkıcı deprem üretme potansiyeli yüksek fay hatlarının yer aldığı bir bölgede konumlanmaktadır. Tarih boyunca, Anadolu yarımadasında meydana gelen depremler büyük can ve mal kayıplarına sebep olmuştur. Bu bağlamda, nüfusun ve sanayileşmenin çok yoğun olduğu Marmara Bölgesinde deprem risk değerlendirme çalışmalarının yoğunlaşması ve gerekli önlemlerin alınması büyük önem arz etmektedir. Bu çalışmada, 6306 sayılı \"Afet Riski Altındaki Alanların Dönüştürülmesi Hakkında Kanun\" kapsamında tanımlanan binaların bölgesel deprem riski dağılımının belirlenmesi için riskli yapıların tespitine ilişkin esaslar başlığı altında öngörülen basitleştirilmiş yöntemler kullanılarak Kocaeli ili İzmit ilçesinde bulunan 19940 bina incelenmiştir. Söz konusu yöntem, hızlı sokak taraması prensiplerini dikkate alarak bölgesel deprem risk önceliklendirmesini hedeflemektedir. Saha incelemelerinden elde edilen sonuçlar, nüfus yoğunluğu ve dağılımı, acil toplanma alanı dağılımı, toplam yapı alanı gibi parametrelerle beraber değerlendirilerek İzmit ilçesinde deprem risk öncelikli bölgelerin belirlenmesine çalışılmıştır.Article Gypsophila Eriocalyx Roots Inhibit Proliferation, Migration, and Tgf-Β Signaling in Melanoma Cells(Walter de Gruyter GmbH, 2025) Azbazdar, Yagmur; Ozhan, Gunes; Helvacioglu, SelinObjectives: Melanoma is a highly malignant and serious form of skin cancer. In addition to the standard treatments, complementary approaches, including phytotherapy, are also used to alleviate symptoms and improve patient well- being. This study aims to investigate the anticancer effects of Gypsophila eriocalyx (GE), an endemic species from Türkiye, on melanoma cells. We set out to determine the efficacy of GE in inhibiting melanoma cell proliferation, migration, and growth, and to explore its underlying mechanisms. Methods: We examined the impact of GE on the prolifera- tion of two melanoma cell lines, Malme-3M and SK-MEL-28, and assessed its developmental toxicity in zebrafish em- bryos. Next, we evaluated GE’s influence on colony forma- tion and wound healing in melanoma cells, as well as its ability to induce apoptosis and affect the TGF-β/Smad signaling pathway, by measuring pathway reporter activity and target gene expression. Results: GE inhibited cell proliferation in melanoma cell lines at concentrations 104 to 488 times lower than those required for normal non-malignant L929 fibroblast cells. In zebrafish embryos, GE demonstrated developmental toxicity only at concentrations above 50 μg/mL. GE treatment significantly impaired the colony formation and wound healing abilities of melanoma cells, indicating reduced pro- liferation and migration. Moreover, GE induced apoptosis in melanoma cells and inhibited the TGF-β/Smad signaling pathway, as evidenced by decreased pathway reporter activity and target gene expression. Conclusions: This study highlights the potential of GE as a novel therapeutic agent in melanoma treatment by demon- strating its ability to inhibit tumor growth and progressionArticle Citation - Scopus: 3University Librarians’ Perceptions of Artificial Intelligence, Its Application Areas in Libraries, and The Future(University and Research Librarians Association (UNAK), 2024) Gürdal, Gültekin; Çuhadar, Sami; Mert, Selma; Gezer, Çağatay; Helvacıoğlu, Ece; Arus, Oya; Aslan, Özlem; Karslı, Melahat; Sönmez, Çiğdem; Taş, Ali; Açıkalın, Cansu; Mazlumoğlu, Ayça Aydemir; Erken, Mehmet; Yılmaz, Müberra; Çerkez, Özlem Araz; Uğur, Emrullah; Menemenlioğlu, Alper; Şenoğlu, Aysel; Atlı, Songül; Cuhadar, Sami; Gurdal, Gultekin; Erken, Mehmet; Mert, Selma; Gezer, Cagatay; Helvacıoğlu, Ece; Atli, SongülGünümüzde kütüphaneler, değişen teknoloji ve yeniliklerden etkilenen kurumlar arasında yer almaktadır. Yapay zeka teknolojilerinin popüler hale gelmesi, kütüphane hizmetlerini de dönüştürmeye başlamıştır. Bu araştırmada, Türkiye’deki üniversite kütüphanelerinin yapay zeka teknoloji ve uygulamalarının gelişim sürecinde yapmış olduğu ve yapmayı planladığı düzenlemeleri tespit etmek ve ilgili döneme özel geliştirdikleri hizmetleri belirlemek amacıyla bir anket uygulanmıştır. Anket, Türkiye’deki 208 üniversite kütüphanesinden 111 üniversite kütüphanesi yöneticisinin katılımıyla gerçekleştirilmiştir. Verilerin analizi ile üniversite kütüphanelerinin yapay zeka teknolojileri ve uygulamaları hakkındaki durumu, bilgi ve farkındalık düzeyleri belirlenmiş, eksik ve zayıf yönlerin geliştirilmesine yönelik önlemler ve öneriler sunulmuştur. İlgili araştırma, yapay zeka konusunda Türkiye’de üniversite kütüphanesi yöneticilerinden görüş ve öneri alarak gerçekleştirilen ilk ve en kapsamlı çalışmadır. Araştırma bulguları, üniversite kütüphanelerinin ChatGPT, Gemini, Grammarly vb. yapay zeka uygulamalarını belirli düzeyde kullandıklarını ancak yapay zeka ile ilgili kurumsal politika geliştirme, personele yetkinlik kazandırma ve planlama konularında ihtiyaçlarının olduğu ortaya çıkmıştır.Article Citation - WoS: 1Citation - Scopus: 1Investigation of Flow and Heat Transfer Performance of Gyroid Structure as Porous Media(Turkish Soc Thermal Sciences Technology, 2024) Genc, Alper Mete; Karadeniz, Ziya HaktanThere are active and passive methods used to improve heat transfer. One of the passive methods is utilising porous media with high heat transfer surface area. Porous media are divided into two groups: regular and irregular structures. One of the regular structures is triply periodic minimal surfaces (TPMS), which have been studied quite frequently recently. In this study, heat transfer and flow analysis of a Gyroid geometry, one of the most used TPMS in the literature, is investigated numerically considering the conjugate heat transfer conditions. A single porosity is considered (epsilon = 0.6), and aluminium, ceramic and PLA are selected for the heat exchanger material to examine the temperature change in the heat exchanger. To understand the different flow characteristics, Reynolds numbers are assumed to be 19.12, 95.61 and 172.09. The fluid inlet temperature is assumed to be constant at 298.15 K, and the initial temperature of the heat exchanger is assumed to be constant at 278.15 K to be consistent with the regenerative heat recovery temperature difference in ventilation standards. Nusselt numbers under different operating conditions are compared, and it is the ceramic material with low thermal diffusivity is at the highest level despite its low thermal conductivity. At the highest Reynolds number, it provided approximately 6% better heat transfer than the aluminium heat exchanger.Article Citation - Scopus: 1Anomalous Crustal Structure Beneath the Örenli-Eğiller Depression Zone, Inferred From Magnetotelluric Studies, Western Anatolia, Türkiye(TÜBİTAK - Türkiye Bilimsel ve Teknolojik Araştırma Kurumu, 2024) Chandrasekharam, Dornadula; Raju, K.; Subba Rao, P.B.V.; Baba, AlperIn Türkiye, the prevalence of high radiogenic granites makes them ideal locations for initiating enhanced geothermal system (EGS) projects. One such occurrence of these granites is observed in the Kozak area of the Bergama region. To assess the energy potential of this site, a magnetotelluric (MT) survey was conducted, focusing on determining the depth distribution of the intrusive granite. The survey employed dimensionality analysis, utilizing Bahr skew and phase tensor analyses that denote a 2D subsurface nature up to 100 s and beyond that a 3D nature. In the present study, we interpreted MT data up to 100 s. The data collected, including rotated impedance tensors and tippers, were inverted using a nonlinear conjugate gradient algorithm integrated into the MT interpretation software of the WinG Link 2D inversion data modeling package. Multiple homogeneous half-space initial models were tested during the 2D inversion process. The findings indicate the existence of a midcrustal conductor associated with graphites and iron sulfides in the source region. This conductivity may be attributed to processes such as exsolution of metamorphic fluids, influx of mantle sources, or the entry of magmatic fluids through transcrustal fault zones. The findings indicate that the intrusive granite was emplaced along a NE–SW major fault, penetrating shallow crustal levels. The depth of this granite intrusion is determined to be 15 km, covering an outcrop area of 60 km². This detailed geological information allows a comprehensive assessment of the power-generating capacity of the intrusive granite. The results of this investigation contribute valuable insights for the development and optimization of Enhanced Geothermal System (EGS) projects in the region. © 2024, TUBITAK. All rights reserved.Article Citation - WoS: 1Citation - Scopus: 2Lacoo3 Is a Promising Catalyst for the Dry Reforming of Benzene Used as a Surrogate of Biomass Tar(Tubitak Scientific & Technological Research Council Turkey, 2024) Çağlar, Başar; Üner, DenizTar build-up is one of the bottlenecks of biomass gasification processes. Dry reforming of tar is an alternative solution if the oxygen chemical potential on the catalyst surface is at a sufficient level. For this purpose, an oxygen-donor perovskite, $LaCoO_3$, was used as a catalyst for the dry reforming of tar. To circumvent the complexity of the tar and its constituents, the benzene molecule was chosen as a model compound. Dry reforming of benzene vapor on the $LaCoO_3$ catalyst was investigated at temperatures of 600, 700, and 800 °C; at $CO_2/C_6H_6$ ratios of 3, 6, and 12; and at space velocities of 14,000 and 28,000 h–1. The conventional Ni(15 wt.%)/$Al_2O_3$ catalyst was also used as a reference material to determine the relative activity of the $LaCoO_3$ catalyst. Different characterization techniques such as X-ray diffraction, $N_2$ adsorption-desorption, temperature-programmed reduction, and oxidation were used to determine the physicochemical characteristics of the catalysts. The findings demonstrated that the $LaCoO_3$ catalyst has higher $CO_2$ conversion, higher $H_2$ and CO yields, and better stability than the Ni(15 wt.%)/γ-$Al_2O_3$ catalyst. The improvement in activity was attributed to the strong capacity of $LaCoO_3$ for oxygen exchange. The transfer of lattice oxygen from the surface of the $LaCoO_3$ catalyst facilitates the oxidation of carbon and other surface species and leads to higher conversion and yields.Article Citation - WoS: 3Citation - Scopus: 3Β-Ketoenamine-linked covalent organic framework for efficient iodine capture(Tubitak Scientific & Technological Research Council Turkey, 2024) Büyükçakır, OnurExploring the materials that effectively capture radioactive iodine is crucial in managing nuclear waste produced from nuclear power plants. In this study, a β-ketoenamine-linked covalent organic framework (bCOF) is reported as an effective adsorbent to capture iodine from both vapor and solution. The bCOF’s high porosity and heteroatom-rich skeleton offer notable iodine vapor uptake capacity of up to 2.51g $g^{–1}$ at 75 °C under ambient pressure. Furthermore, after five consecutive adsorption-desorption cycles, the bCOF demonstrates high reusability performance with significant iodine vapor capacity retention. The adsorption mechanism was also investigated using various ex situ structural characterization techniques, and these mechanistic studies revealed the existence of a strong chemical interaction between the bCOF and iodine. The bCOF also showed good iodine uptake performance of up to 512 mg $g^{–1}$ in cyclohexane with high removal efficiencies. The bCOF’s performance in adsorbing iodine from both vapor and solution makes it a promising material to be used as an effective adsorbent in capturing radioactive iodine emissions from nuclear power plants.