Master Degree / Yüksek Lisans Tezleri

Permanent URI for this collectionhttps://hdl.handle.net/11147/3008

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  • Master Thesis
    Application of Artificial Neural Networks To Structural Reliability Problems
    (01. Izmir Institute of Technology, 2023) Aktaş, Engin; Aktaş, Engin; Maguire, Marc; 03.03. Department of Civil Engineering; 03. Faculty of Engineering; 01. Izmir Institute of Technology
    The contemporary approach in structural engineering indirectly addresses uncertainties arising from load and resistance parameters by using safety factors. To consider these uncertainties in structural engineering, it is necessary to incorporate their statistical properties into the analysis and design process. However, this approach requires the calculation of challenging multi-fold probability integrals. Approximate methods known as FORM and SORM have been developed as an alternative to calculating those integrals. Unfortunately, these methods might have accuracy and convergence problems depending on the problem at hand. Simulation-based structural reliability methods have been developed to overcome the problems associated with approximate methods. The main problem with these methods is that they are often computationally expensive when along with finite element analysis, or it is hard to implement them when a more specific method is chosen to reduce computational costs. In this study, artificial neural networks have been applied to structural reliability problems to obtain accurate probability estimates with low computational cost. A special type of learning algorithm called Bayesian Regularization was used in the training of artificial neural networks. Additionally, details of the application of artificial neural networks to structural reliability problems are provided. At the end of the study, the advantages and disadvantages of applying artificial neural networks to structural reliability problems are presented and compared with other known structural reliability methods. Additionally, a new convergence criterion and an adaptive algorithm have been developed. It was observed that applying artificial neural networks to structural reliability problems provides both efficient and accurate probability estimates.
  • Master Thesis
    Development of a Machine Learning Platform for Analysis of Mitochondrial Features in Live-Cell Images
    (01. Izmir Institute of Technology, 2022) Tuğlular, Tuğkan; Tuğlular, Tuğkan; Tuğlular, Tuğkan; 03.04. Department of Computer Engineering; 03. Faculty of Engineering; 01. Izmir Institute of Technology
    It is a laborious and error-prone manual process to mark the organelles in 2D and 3D images of living cells and identify the behavioral feedback to stimulations under measured conditions. This manual process can be simplified by being largely automated with machine learning techniques. We created a machine learning-based software platform named MitoML, which extracts sub-cellular structures, specifically mitochondria, and helps to identify the effects of external factors or changes under natural conditions. We investigate appropriate machine learning techniques for these objectives. Image processing and segmentation techniques with neural networks, enable researchers to carry out experiments with much better accuracy and a larger scale by automatically segmenting and counting the mitochondria, calculate the energy potentials based on region brightness. This way, analysis of mitochondria feedback in healthy and cancer cells under various conditions, such as nanomedicine and different treatment therapies, can be performed using MitoML. As a result of our work, we proposed a cascaded neural network architecture that can identify and count mitochondria, quantify its energy levels in fluorescence and other microscopy images, fast and at a standard reliable accuracy. Our test results outperformed the classical image processing algorithms provided in segmentation tools and software for medical image segmentation which was taken as a base line. Achieved accuracy rates 93.4% and %89.6 according to Dice and IoU metrics respectively are also better than any other related work encountered during the research. The proposed method can be improved to cover other sub-cellular structures relieving the researchers from non-standardized and laborious manual work which is prone to human error.
  • Master Thesis
    Application of Graph Neural Networks on Software Modeling
    (01. Izmir Institute of Technology, 2020) Tuğlular, Tuğkan; Belli, Fevzi; Tuğlular, Tuğkan; Belli, Fevzi; 03.04. Department of Computer Engineering; 03. Faculty of Engineering; 01. Izmir Institute of Technology
    Deficiencies and inconsistencies introduced during the modeling of software systems can cause undesirable consequences that may result in high costs and negatively affect the quality of all developments made using these models. Therefore, creating better models will help the software engineers to build better software systems that meet expectations. One of the software modelling methods used for analysis of graphical user interfaces is Event Sequence Graphs (ESG). The goal of this thesis is to propose a method that predicts missing or forgotten links between events defined in an ESG via Graph Neural Networks (GNN). A five-step process consisting of the following steps is proposed: (i) data collection from ESG model, (ii) dataset transformation, (iii) GNN model training, (iv) validation of trained model and (v) testing the model on unseen data. Three performance metrics, namely cross entropy loss, area under curve and accuracy, were used to measure the performance of the GNN models. Examining the results of the experiments performed on different datasets and different variations of GNN, shows that even with relatively small datasets prepared from ESG models, predicts missing or forgotten links between events defined in an ESG can be achieved.