WoS İndeksli Yayınlar Koleksiyonu / WoS Indexed Publications Collection
Permanent URI for this collectionhttps://hdl.handle.net/11147/7150
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Article Citation - WoS: 4Citation - Scopus: 3Boron Stress Signal Is Transmitted Through the Tor Pathway(Elsevier, 2023) Uluışık, İrem; Koç, Ahmet; Koç, Ahmet; 04.03. Department of Molecular Biology and Genetics; 04. Faculty of Science; 01. Izmir Institute of TechnologyAlthough boron is an essential element for many organisms, an excess amount of it can cause toxicity, and the mechanism behind this toxicity is not yet fully understood. The Gcn4 transcription factor plays a crucial role in the boron stress response by directly activating the expression of the boron efflux pump Atr1. More than a dozen transcription factors and multiple cell signaling pathways have roles in regulating the Gcn4 transcription factor under various circumstances. However, it is unknown which pathways or factors mediate boron signaling to Gcn4. Using the yeast Saccharomyces cerevisiae as a model, we analyzed the factors that converge on the Gcn4 transcription factor to assess their possible roles in boron stress signaling. Our findings show that the GCN system is activated by uncharged tRNA stress in response to boron treatment and that GCN1, which plays a role in transferring uncharged tRNAs to Gcn2, is necessary for the kinase activity of Gcn2. The SNF and PKA pathways were not involved in mediating boron stress, even though they interact with Gcn4. Mutations in TOR pathway genes, such as GLN3 and TOR1, abolished Gcn4 and ATR1 activation in response to boric acid treatment. Therefore, our study suggests that the TOR pathway must be functional to form a proper response against boric acid stress.Article Citation - WoS: 14Supercritical Ethanol Drying of Zinc Borates of 2zno Center Dot 3b(2)o(3)center Dot 3h(2)o and Zno Center Dot B2o3 Center Dot 2h(2)o(Elsevier Ltd., 2011) Gönen, Mehmet; Ülkü, Semra; Balköse, Devrim; Balköse, Devrim; Ülkü, Semra; 03.02. Department of Chemical Engineering; 03. Faculty of Engineering; 01. Izmir Institute of TechnologySupercritical ethanol (SCE) drying of zinc borates was investigated to obtain dry zinc borate nanoparticles and to elucidate possible chemical interactions between zinc borates and ethanol. Commercial and synthesized 2ZnO center dot 3B(2)O(3)center dot 3H(2)O and ZnO center dot B2O3 center dot 2H(2)O samples were dried by both conventional and SCE drying methods and the products were compared. Zinc borates were characterized using X-ray powder diffraction (XRD), thermo gravimetric analysis (TGA), Fourier transform infrared (FTIR) analysis, transmission electron microscopy (TEM), scanning electron microscopy (SEM) and helium pycnometer. Zn and B contents of samples were also determined by analytical titration. It was found that zinc borate of ZnO center dot B2O3 center dot 2H(2)O decomposed completely into zinc oxide and boric acid. However, zinc borate having oxide formula of 2ZnO center dot 3B(2)O(3)center dot 3H(2)O decomposed partially to form anhydrous zinc borate, zinc oxide, water and boric acid during the SCE drying carried out at 250 degrees C and 6.5 MPa. Boric acid and water were extracted from both of zinc borates by supercritical ethanol. The extraction of boric acid by ethanol in the SCE drying of zinc borates is an important result which can be utilized in the production of boric acid from water insoluble natural minerals, e.g. colemanite. The boric acid-ethanol solution could be directly utilized in the synthesis of ethyl borate. (C) 2011 Elsevier B.V. All rights reserved.
