WoS İndeksli Yayınlar Koleksiyonu / WoS Indexed Publications Collection
Permanent URI for this collectionhttps://hdl.handle.net/11147/7150
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Article AI-Supported Seismic Performance Evaluation of Structures: Challenges, Gaps, and Future Directions at Early Design Stages(Elsevier Sci Ltd, 2026) Ak, Fatma; Ekici, Berk; Demir, UgurThis study reviews 91 journal articles that intersect with earthquake-resistant building design and artificial intelligence (AI)- based modeling, utilizing machine learning, deep learning, and metaheuristic optimization algorithms. Previous reviews on AI applications have examined engineering problems without considering the impact of architectural design parameters and structural irregularities on seismic performance. This review discusses the role of AI in integrating architectural design variables and seismic performance objectives, highlighting challenges, gaps, and future directions in the early design phase. The reviewed articles demonstrate that AI is successful in addressing seismic performance objectives; however, a holistic framework for assessing architectural and structural variables has not been presented. The review highlights key findings, gaps, and future directions for those involved in earthquake-resistant building design utilizing AI.Article Artificial Intelligence for Improving Thermal Comfort through Envelope Design in Residential Buildings: Recent Developments and Future Directions(Elsevier Science Sa, 2026) Bayraktar, Arda; Ekici, BerkEnvelopes are vital components for improving thermal comfort in almost all building typologies. Yet, the design and analysis of envelopes are complex, as they involve multiple aspects and various parameters, ensuring comfort standards. Improving thermal comfort in residential buildings is within the scope of researchers to suggest sustainable design alternatives that consider multiple performance aspects and design parameters. Previous review articles have focused on improving thermal performance in residential buildings from the perspective of envelope technology, materials, and design strategies. However, none of them investigated current developments using artificial intelligence (AI), which inevitably supports decision-making in complex circumstances for a sustainable built environment. This review examines the contribution of AI methods, which consist of metaheuristic optimization and machine learning algorithms as sub-branches, to envelope parameters. The paper systematically reviews 95 relevant works on AI, including early approaches, to provide a comprehensive overview of current developments, following PRISMA guidelines. The results showed that early applications considered conventional approaches to improve thermal comfort and energy performance, which mostly limit the results to specified cases. On the other hand, studies utilizing AI methods dealt with numerous parameters, allowing them to cope with complex envelope systems in a reasonable amount of time. The study addresses relevant research questions related to the trends, research methods, system types, AI methods, data types, and their relation to performance and envelope parameters. The study also provides actionable insight, underlining gaps and future works for utilizing machine learning methods in the reviewed research domain.Article Development and Validation of Regression Model via Machine Learning to Estimate Thermal Conductivity and Heat Flow Using Igneous Rocks from the Dikili-Bergama Geothermal Region, Western Anatolia(Pergamon-Elsevier Science Ltd, 2026) Ayzit, Tolga; Sahin, Onur Gungor; Erol, Selcuk; Baba, AlperThermal conductivity is a fundamental parameter that significantly influences the thermal regime of the lithosphere. It plays a crucial role in a variety of geological applications, including geothermal energy exploration, igneous system assessment, and tectonic modeling. In this study, a machine learning approach is used to predict the thermal conductivity of igneous rocks based on the composition of major oxides. A total of 488 samples from different regions of the world were analyzed. The thermal conductivity values ranged from 1.20 to 3.74 Wm(-1) K-1 and the mean value was 2.61 Wm(-1) K-1. The Random Forest (RF) algorithm was used, resulting in a high coefficient of determination (R-2 = 0.913 for training and R-2 = 0.794 for testing) and a root mean square error (RMSE) of 0.112 and 0.179, respectively. Significance analysis of the traits identified SiO2 (>40 %), Na2O (>15 %) and Al2O3 (>10 %) as the most influential predictors. The study presented results from the Western Anatolia region, where felsic rocks had the highest thermal conductivity (mean = 2.69 Wm(-)(1)K(-)(1)) compared to mafic (mean = 2.34 Wm(-)(1)K(-)(1)) and ultramafic rocks (mean = 2.39 Wm(-)(1)K(-)(1)). In addition, the study evaluated the predictive capabilities of machine learning models for the igneous rocks of the Dikili-Bergama region and compared the results with those of saturated models. Using these data, we calculated heat flow values of up to 400 mWm(-2) under saturated conditions in western Anatolia. These results highlight the value of integrating geochemical data with machine learning to improve geothermal resource exploration and lithospheric modeling.Article A Knowledge-Driven Computer Vision Framework for Automated Atomic Force Microscopy Surface Characterization(Elsevier Science Ltd, 2026) Deveci, D. Gemici; Barandir, T. Karakoyun; Unverdi, O.; Celebi, C.This study presents an innovative analytical framework developed to automate Atomic Force Microscopy (AFM)-based surface characterization. The proposed methodology integrates computer vision (CV) algorithms and machine learning (ML) techniques to overcome the limitations of conventional observer-dependent approaches and visual inspection methods. In the first stage of the two-step data processing pipeline, raw AFM signals were converted into structured datasets, correspondences between images acquired under different loading conditions were identified, and drift effects in both direction and magnitude were predicted using a LightGBM-based machine learning (ML) model to guide subsequent analytical processes. This process establishes a unified coordinate reference across varying force levels, enabling pixel-level comparability of surface maps. In the second stage, the aligned datasets are systematically analyzed through block-based local maxima detection, edge-based contour extraction, morphological filtering, and skeletonization algorithms. In this way, ridge-like surface features are reliably identified and quantitatively evaluated along their axes under varying force conditions. The framework ensures data integrity while enabling high-resolution and reproducible analyzes. Beyond its automation capability, it is distinguished by its integrated, modular architecture, where each component operates sequentially along a unified processing pipeline. The methodology was validated using epitaxial monolayer graphene grown on the C-face of SiC, successfully demonstrating its ability to resolve both geometric and force-dependent mechanical responses. In this regard, the proposed system extends beyond conventional cross-sectional analysis by providing a drift-aware, knowledge-guided compensation mechanism and directionally resolved evaluation, offering a robust, automation-ready infrastructure for nanoscale surface characterization.Article A Machine Learning Model for Predicting Oligoclonal Band Positivity Using Routine Cerebrospinal Fluid and Serum Biochemical Markers(Oxford University Press Inc, 2025) Gözgöz, Hazar; Orhan, Oğuzhan; Akan Konuk, Başak; Akan, PınarOBJECTIVE: To develop and validate a machine learning model for predicting oligoclonal band (OCB) positivity using routine cerebrospinal fluid (CSF) and serum biochemical markers to improve the diagnostic accuracy and efficiency of assessing intrathecal immunoglobulin G (IgG) synthesis. METHODS: In this retrospective study (n = 1709), an ensemble model was developed using 8 refined CSF and serum parameters. Combining optimized CatBoost, XGBoost, and LightGBM classifiers, the model was trained and evaluated using a 2-phase workflow, including 5-fold cross-validation and validation on independent internal (n = 342) and external (n = 49) cohorts. RESULTS: The developed ensemble model achieved a receiver operating characteristic-area under the curve (ROC-AUC) of 0.902 on the internal test set, significantly outperforming the conventional IgG index (ROC-AUC, 0.795). At its optimal threshold, the model demonstrated an accuracy of 0.830, with a sensitivity of 0.714 and a specificity of 0.916. On the external validation cohort, it achieved 90% accuracy and 96% sensitivity. CONCLUSIONS: A novel machine learning ensemble model accurately predicts OCB positivity using routine laboratory data and demonstrates superior performance compared with the IgG index. This approach represents a significant step in applying artificial intelligence in laboratory medicine, with the potential to enhance diagnostic efficiency. Prospective, multicenter validation is essential for broader clinical implementation. © The Author(s) 2025.Article Machine Learning Integrated Solvothermal Liquefaction of Lignocellulosic Biomass to Maximize Bio-Oil Yield(Elsevier Sci Ltd, 2025) Ocal, Bulutcem; Sildir, Hasan; Yuksel, AsliAccelerating consumption of limited fossil-based for economic growth and simultaneously mitigating greenhouse gas emissions create a dilemma that is waiting to be solved by researchers. In this context, solvothermal liquefaction of lignocellulosic biomass to produce bio-oil is a promising way to obtain green energy. However, maximizing bio-oil is challenging to optimize the operating parameters employing conventional techniques due to the complexity and non-linearity of the process. Lately, machine learning approaches have become powerful tools for addressing complex nonlinear problems by predicting process behavior and regulating operating parameters for optimization by learning from datasets. The current research demonstrates integrating experimental and a developed artificial neural network model to optimize solvothermal liquefaction of pinus brutia, based on temperature, water fraction, and biomass amount in maximizing bio-oil generation for the first time. The highest bio-oil yields were obtained at 31.40 %, 18.68 %, and 39.69 %, respectively, with 4 and 8 g biomass in the presence of water, ethanol, and water/ethanol mixture at 240 degrees C. Under the model conditions, the maximum biooil yield was experimentally verified at 46.20%, which was predicted at 48.8 %. Beyond providing accurate yield predictions, the approach highlights the potential of date-driven modeling to reduce experimental workload and cost while aiding parameter selection to improve efficiency. These outcomes emphasize the importance of machine learning integration into liquefaction process, providing remarkable results for future process design, optimization, and scalability. On the other hand, the study also includes characterization results (ultimate, proximate, FTIR, and GC-MS) of selected products and pinus brutia.Article Knowledge-Based Training of Learning Architectures Under Input Sensitivity Constraints for Improved Explainability(Pergamon-Elsevier Science Ltd, 2026) Sildir, Hasan; Erturk, Emrullah; Edizer, Deniz Tuna; Deliismail, Ozgun; Durna, Yusuf Muhammed; Hamit, BahtiyarThe traditional machine learning (ML) training problem is unconstrained and lacks an explicit formulation of the underlying driving phenomena. Such a formulation, based solely on experimental data, does not ensure the delivery of qualitative knowledge among variables due to many theoretical issues in the optimization task. This study further tightens Artificial Neural Networks (ANNs) training by including input sensitivities as additional constraints and applies to regression and classification tasks based on literature data. In theory, such sensitivity represents the change direction of the target variable per change in measurements from indicators. The resulting nonlinear optimization problem is solved th rough a rigorous solver and includes the sensitivity expressions through algorithmic differentiation. Compared to traditional methods, with an acceptable decrease in the prediction capability, the proposed model delivers more intuitive, explainable, and experimentally verifiable predictions under input variable variations, under robustness to overfitting, while serving robust identification tasks. A classification case study includes a patient-oriented clinical decision support system development based on the impact of cancer-indicating variables. A competitive test prediction accuracy is obtained compared to commonly used algorithms despite 10 % decrease in the training. The regression case is built upon the energy load estimation to account for prominent considerations to obtain desired sensitivity patterns and proposed methodology delivers significant accuracy drop compared to some formulations to address knowledge patterns. The approach delivers a compatible pattern with practitioner expertise and is compared to widely used machine learning algorithms, whose performances are evaluated through common statistics in addition to multi-variable response graphs.Article Unveiling the Design Rules for Tunable Emission in Graphene Quantum Dots: A High-Throughput TDDFT and Machine Learning Perspective(Indian Acad Sciences, 2025) Ozonder, Sener; Ozdemir, Mustafa Coskun; Unlu, CanerThe ability to tailor the optical properties of graphene quantum dots (GQDs) is critical for their application in optoelectronics, bioimaging and sensing. However, a comprehensive understanding of how shape, size and doping influence their emission properties remains elusive. In this study, we conduct a systematic high-throughput time-dependent density functional theory (TDDFT) and machine learning analysis of 284 distinct GQDs, varying in shape (square, hexagonal, amorphous), size (similar to\documentclass[12pt]{minimal} \usepackage{amsmath} \usepackage{wasysym} \usepackage{amsfonts} \usepackage{amssymb} \usepackage{amsbsy} \usepackage{mathrsfs} \usepackage{upgreek} \setlength{\oddsidemargin}{-69pt} \begin{document}$$\sim$$\end{document}1-2 nm) and doping configurations with elements B, N, O, S and P at varying concentrations (1.5-7%). Our findings reveal clear design principles for tuning emission wavelengths based on dopant type, concentration and GQD geometry. Notably, sulfur doping at specific concentrations consistently results in higher emission energies, with certain configurations yielding emissions within the visible range. By elucidating how quantum confinement effects, symmetry breaking and dopant-induced modifications govern GQD optical properties, we provide practical design rules for tailoring emission spectra for next-generation optoelectronic, bioimaging and sensing applications.Article An Alternative Software Benchmarking Dataset: Effort Estimation With Machine Learning(Elsevier Science Inc, 2026) Yurum, Ozan Rasit; Unlu, Huseyin; Demirors, OnurEffort estimation plays a vital role in software project planning, as accurate estimates of required human resources are essential for success. Traditional estimation models often depend on historical size and effort data, yet organizations frequently struggle to access reliable effort records. Public benchmarking datasets like ISBSG offer useful data but may lack coverage or involve licensing fees. To address this issue, we previously introduced a free, extendable benchmarking dataset that integrates functional size and effort data extracted from 18 studies. In this study, we examine the effectiveness of our dataset for predictive effort estimation and compare it with the widely used ISBSG dataset. Our analysis includes 337 records from our dataset and 732 ISBSG projects, focusing on those with COSMIC size data. We first developed and compared models using linear regression and nine machine learning algorithms - Bayesian Ridge, Ridge Regression, Decision Tree, Random Forest, XGBoost, LightGBM, k-Nearest Neighbors, Multi-Layer Perceptron, and Support Vector Regression. Then, we selected the best-performing models and applied them to an unseen evaluation dataset to assess their generalization performance. The results show that machine learning performance varies based on evaluation method and dataset characteristics. Despite having fewer records, our dataset enabled more accurate predictions than ISBSG in most cases, highlighting its potential for effort estimation. This study demonstrates the viability of our dataset for building predictive models and supports the use of machine learning in improving estimation accuracy. Expanding this dataset could offer a valuable, open-access resource for organizations seeking effective and lowcost estimation solutions.Article Comprehensive Analysis and Machine Learning-Based Solutions for Drift Behavior in Ambient Atomic Force Microscope Conditions(Pergamon-Elsevier Science Ltd, 2025) Deveci, D. Gemici; Barandir, T. Karakoyun; Unverdi, O.; Celebi, C.; Temur, L. O.; Atilla, D. C.This study outlines the effectiveness of combining numerical methods, Computer Vision (CV) and Machine Learning (ML) approaches to analyze and predict drift behavior in high-resolution Atomic Force Microscope (AFM) scanning procedures. Using Long Short-Term Memory (LSTM) models for time series analysis and the Light Gradient Boosting Machine (LightGBM) algorithm for predictive modeling, significant progress was achieved in understanding the dynamic and variable nature of drift and mitigating its impact on scanning. The models demonstrated a robust predictive capability, achieving approximately 94% accuracy in drift predictions. The study emphasizes the nonstationary characteristics of drift and demonstrates how the selection of features directly related to the target variable enhances the efficiency of the model and enables adaptive real-time correction. These findings confirm the predictive strength of the models and highlight the potential for integrating ML predictions with real-time feedback mechanisms to improve the resolution and stability of AFM imaging in both scientific and industrial applications.