WoS İndeksli Yayınlar Koleksiyonu / WoS Indexed Publications Collection
Permanent URI for this collectionhttps://hdl.handle.net/11147/7150
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Article Citation - WoS: 1Citation - Scopus: 1Exploring Sainfoin (Onobrychis Viciifolia) Seed Flour as a Sustainable Plant-Based Food: Germination-Induced Changes in Nutritional Quality, Anti-Nutritional Factors, Phenolic Content, Bioaccessibility, and in Vitro Toxicity(Wiley, 2025) Kaya, Havva Polat; Gungor, Sevde Nur; Tuncel, Nese Yilmaz; Sakarya, Fatma Betul; Andac, Ali Emre; Ozkan, Gulay; Tuncel, Necati BarisBackground and Objectives: Sainfoin is a drought-resistant perennial plant mainly used as animal feed, but its seeds remain underexplored as a food source. This study investigates the effects of germination on the nutritional quality of dehulled sainfoin seeds. Specifically, it examines changes in proximate composition, antinutrients (hydrocyanic acid, tannins, phytates, saponins, and trypsin inhibitors), in vitro starch digestibility, phenolic content, antioxidant capacity, and cytotoxicity. Findings: Germination significantly increased crude protein (up to 45%) and fat (up to 10%) contents. Despite low total starch (similar to 7%), 45-h germination reduced total digestible starch while increasing rapidly digestible starch. Antinutrient levels decreased significantly-tannins by 57%, phytates by 30%, saponins by 40%, and trypsin inhibitors by 29%-with the exception of hydrocyanic acid. Although total phenolics, flavonoids, and antioxidant capacity declined, their bioaccessibility improved. No cytotoxic effects were observed in either raw or germinated seeds. Conclusions: Germination improved the nutritional profile of sainfoin seeds by increasing protein and fat contents, while reducing most antinutrients. Despite a decrease in antioxidant levels, their bioaccessibility was enhanched. The absence of cytotoxic effects further supports the potential application of germinated sainfoin seeds in human nutrition. Significance and Novelty: Although few studies have focused on the green form of sainfoin, which is commonly used as livestock feed, this study reveals that sainfoin seeds offer substantial potential as food, with germination emerging as a simple and effective approach to improving their nutritional properties.Article Time-Dependent Effects of Low-Intensity Pulsed Ultrasound on Apoptosis and Autophagy in Malignant Melanoma Stem Cells(Wiley, 2025) Dikici, Omer; Ozdil, Berrin; Yesin, Taha Kadir; Dikici, Aylin; Adali, Yasemin; Aktug, HuseyinCancer stem cells (CSCs) in malignant melanoma contribute to therapeutic resistance and tumour recurrence. While low-intensity pulsed ultrasound (LIPUS) has been proposed as a non-invasive strategy to induce cell death, its effects on CSC-specific apoptotic and autophagic responses remain unclear. This study aimed to explore the time-dependent effects of LIPUS on apoptosis and autophagy in CD133+ melanoma CSCs and CD133- non-stem melanoma cells. Human melanoma cells (CHL-1) were sorted via FACS into CD133+ and CD133- populations. Cells were exposed to LIPUS (1 MHz, 20% duty cycle, 1 W/cm2) for 1, 5, and 10 min. Protein expression levels of Caspase-3, Caspase-8, mTOR, and LC3 were evaluated via immunofluorescence and quantified by image-based analysis. Both cell populations showed significant increases in Casp3, Casp8, mTOR, and LC3 intensities following LIPUS application. Notably, CD133+ cells exhibited delayed but sustained increases in Casp3 and LC3 expression, while CD133- cells responded more rapidly. mTOR activity demonstrated distinct temporal dynamics between the two groups, suggesting differential modulation of autophagy-related pathways. LIPUS triggers temporally distinct apoptotic and autophagic responses in melanoma CSCs and non-stem cancer cells. These findings suggest a potential therapeutic avenue to selectively disrupt CSC survival mechanisms using mechanical stimulation.Article Investigating the Effects of Functionalized Single Wall Carbon Nanotubes on the Cure Behavior of a Carbon/Epoxy Prepreg System by an Optimized Parameter Approach(Wiley, 2025) Oz, Murat; Uz, Yusuf Can; Tanoglu, Gamze; Tanoglu, Metin; Barisik, MuratCarbon/Epoxy composite materials are used in a wide range of applications due to their superior performance. However, their properties are strongly related to cross-linking reactions occurring during the curing process, and a prior estimation of curing parameters is the key to manufacturing the desired material. This study builds a mathematical model to solve the inverse kinetic problem based on differential scanning calorimetry data and later presents its use in curing experiments. The method derived (Gamze-Murat-Neslisah (GMN) approach) determines the pre-exponential and activation energy of the curing process. Later, an extended experimental study was performed. Functionalized single-wall carbon nanotubes (F-SWCNTs) were prepared by oxidizing their surface with carboxyl to enhance the dispersion of the nanoparticulates. The epoxy resin systems were modified with 0.05%, 0.1%, and 0.2% wt. F-SWCNTs, which were impregnated on carbon fibers (CFs). The curing behavior was studied, cure kinetic parameters were determined, and the thermal behavior was characterized. Differential scanning calorimetry (DSC) data sets for CF/epoxy prepregs containing F-SWCNTs were used for the verification of the proposed method. It was found that the GMN approach is in good agreement with the experimentally measured data for all kinetic parameters. The addition of F-SWCNTs increased the material's curing efficiency as the CNTs enhanced heat transport in composites, reducing the activation energy. The results obtained from the GMN algorithm were also found in good agreement with the well-known Kissinger-Akahira-Sunose (KAS) and Kissinger methods, while the current GMN method revealed itself as an accurate algorithm to obtain the activation energy.Article Citation - WoS: 5Citation - Scopus: 5Magnetically Controllable and Degradable Milliscale Swimmers as Intraocular Drug Implants(Wiley, 2025) Yildiz, E.; Bozuyuk, U.; Yildiz, E.; Wang, F.; Han, M.; Karacakol, A.C.; Sitti, M.Intraocular drug implants are increasingly used for retinal treatments, such as age-related macular degeneration and diabetic macular edema, due to the rapidly aging global population. Although these therapies show promise in arresting disease progression and improving vision, intraocular implant-based therapies can cause unexpected complications that require further surgery due to implant dislocation or uncontrolled drug release. These frequent complications of intraocular drug implants can be overcome using magnetically controllable degradable milliscale swimmers (MDMS) with a double-helix body morphology. A biodegradable hydrogel, polyethylene glycol diacrylate, is employed as the primary 3D printing material of MDMS, and it is magnetized by decorating it with biocompatible polydopamine-encapsulated iron-platinum nanoparticles. MDMS have comparable dimensions to commercial intraocular implants that achieve translational motions in both aqueous and vitreous bodies. They can be imaged in real-time using optical coherence tomography, ultrasound, and photoacoustic imaging. Thanks to their biodegradable hydrogel-based structure, they can be loaded with anti-inflammatory drug molecules and release the medications without disrupting retinal epithelial viability and barrier function, and decrease proinflammatory cytokine release significantly. These magnetically controllable swimmers, which degrade in a couple of months, can be used for less invasive and more precise intraocular drug delivery compared to commercial intraocular drug implants. © 2025 The Author(s). Advanced Science published by Wiley-VCH GmbH.Article Integration of Conductive Additives To Pla-Based Biodegradable Composite Films To Improve Their Electrical, Mechanical, and Physical Characteristics(Wiley, 2025) Rakea, Aisha Muthana; Tirkes, Suha; Yildiz, Umit Hakan; Tirkes, Seha; Tayfun, UmitIn this study, Oltu stone powder (OS) and Fe3O4/mica-based conductive pigment (CP) were compounded with polylactic acid (PLA) to develop bio-based conductive films. Four different concentrations of 1%, 10%, 20%, and 30% of powders were applied to determine their optimal concentration in the PLA matrix. The mechanical, thermomechanical, electrical conductivity, melt-flow, and morphological properties of composite films were reported using the tensile, hardness, and impact tests, dynamic mechanical analyses test, linear four-probe method, and atomic force microscopy (AFM), melt-flow index measurements, and scanning electron microscopy methodology, respectively. According to tensile test results, tensile strength and modulus characteristics of PLA decrease with additive integration. However, the elongation value of PLA declined as OS and CP loadings increased. The maximum tensile performance was attained for composites filled with 20% of both CP and OS. The unfilled PLA's Shore D value rose by including OS and CP. At the same loading levels, carbon-based OS produced comparatively higher hardness values than CP, which comprised iron oxide and alumina silicate. AFM analysis revealed that both CP and OS inclusions caused enhancements in surface roughness as their filling amounts increased. In summary, composite samples exhibiting a 20% loading ratio of both OS and CP showed significantly improved mechanical and thermomechanical performances compared to other composites. Composite films with 1% additives have the potential to be applied in electrostatic packing. Additionally, 3D-printed components can be fabricated using composites for applications where appropriate mechanical resistance and electrical conductivity specifications are required.Article Citation - Scopus: 1Transforming Crete's Sustainable Energy Landscape: a Modular Energy Island Approach(Wiley, 2025) Mendez-Morales, Mariela; Karipoglu, Fatih; Ivankovic, Marin; Lukic, Tamara; Rebelo, CarlosThe present paper investigates the conceptual design of a floating offshore renewable energy system-an energy island-developed to provide a sustainable long-term solution to support and expedite the transition toward renewable energy sources (RESs) as a case study in Crete Island, Greece. The optimal site selection in Crete's coastal waters was detected by carefully evaluating the potential for wind, solar, and wave energy alongside environmental and social considerations. Later, the current electricity demand was analyzed, leading to the identification of suitable technologies for renewable energy harvesting and the conceptualization of a floating structure. The findings of this research emphasize the viability of integrating diverse energy sources as a pivotal step for Crete Island to advance toward energy independence and environmental sustainability. Crete's abundant wind and solar resources underscore its capacity to host innovative projects, warranting further exploration into energy surplus storage and export.Article Citation - WoS: 3Citation - Scopus: 3Performance Improvement of Carbon Fiber-Reinforced Abs Composites by Introducing Fullerene Nanoparticles(Wiley, 2025) Akar, Alinda Oyku; Yildiz, Umit Hakan; Tirkes, Seha; Tayfun, Umit; Hacivelioglu, FerdaRecently, polymer composites have been extensively researched in industrial fields such as electrical conductance, ohmic heating, electromagnetic shielding and electrostatic discharge, particularly in engineering polymers reinforced with carbonaceous additions. Herein, fullerene (C60) and short carbon fiber (CF) were incorporated with acrylonitrile-butadiene-styrene copolymer (ABS) using melt-compounding followed by an injection-molding process. Composite samples were produced with contents of 20 wt% of CF besides 0.1, 0.5 and 1.0 wt% of C60. Tensile, impact, hardness and wear tests, conductive atomic force microscopy, dynamic mechanical analysis, thermogravimetric analysis, melt flow index tests and scanning electron microscopy (SEM) were performed to characterize mechanical, electrical, thermomechanical, thermal, melt-flow and structural behaviors of ABS-based composites involving CF and C60. Based on the mechanical test findings obtained for the developed composites, comprising tensile and impact test results, C60 additions contributed to a significant rise in tensile strength and impact resistance of CF-reinforced ABS composites, with a 20% increase in tensile resistance being achieved by introduction C60 into the ABS/CF structure. C60 addition enhanced efficiency by 50% in terms of tensile modulus. Electrical conductivity measurements confirmed that C60 nanoparticles and CF exhibited a synergy. The optimum synergistic ratio of C60/CF was obtained as 0.5/20. The conductive path in the ABS/CF composite system was established by incorporating C60 with different loading amounts. SEM micrographs of composites demonstrated that C60 nanoparticles were dispersed homogeneously into the ABS matrix involving lower amounts of C60. (c) 2025 The Author(s). Polymer International published by John Wiley & Sons Ltd on behalf of Society of Chemical Industry.Conference Object Construction of the Living Networks in Artificial Tissues: Vascularization in Tissue Engineering(Wiley, 2025) Dikici, SerkanConference Object The Interplay Between Sirtuin 1 (Sirt1) and Autophagy/Mitophagy in Serum-Starved Sh-Sy5y Cells(Wiley, 2025) Kartal, Yasemin; Tokat, Unal Metin; Bozkurt, Berkay; Ugur, Pelin Kelicen; Budak, Murat TimurArticle Citation - WoS: 2Citation - Scopus: 2New Copper and Cobalt Complexes Based on a Fluorinated Pyrazole Derivative, Synthesis, Characterization and Antibacterial Activity(Wiley, 2025) Amin, Mina A.; Diker, Halide; Sahin, Onur; Varlikli, Canan; Soliman, Ahmed A.Two copper and cobalt complexes based on 3-(trifluoromethyl)-4-((3-(trifluoromethyl)phenyl)diazenyl)-1H-pyrazol-5-ol (Httdp) have been prepared and characterized using different physicochemical techniques. The crystal structure of the copper complex has been proven to be a square pyramidal, and the cobalt complex has an octahedral structure. DFT calculations of the complexes were performed, and the energy gaps between the HOMO-LUMO of the complexes (-3.38676 to -3.18138 eV) and the Cu (II) complex reflect a higher relative stability compared with Httdp and the Co (II) complex. The antibacterial activities of the two complexes were evaluated. The Co (II) complex demonstrated the highest antibacterial activity against various bacteria compared with Httdp and the Cu (II) complex. The mean inhibition zones exhibited by the Co (II) complex showed the highest activities toward the Gram-negative bacterial strains with mean inhibition zones of 30.3 +/- 0.6 (Staphylococcus aureus) and 25.7 +/- 0.6 (Bacillus subtilis) mm. Docking studies were carried out using S. aureus tyrosyl-tRNA synthetase (PDB ID: 1JIJ) to assess the antimicrobial activities, proving that the complexes were efficient for the protein.
