Molecular Biology and Genetics / Moleküler Biyoloji ve Genetik
Permanent URI for this collectionhttps://hdl.handle.net/11147/9
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Article Citation - WoS: 6Citation - Scopus: 7Mineral Nutrient Acquisition by Cotton Cultivars Grown Under Salt Stress(Taylor and Francis Ltd., 2017) Özyiğit, İbrahim İlker; Doğan, İlhan; Demir, Göksel; Yalçın, İbrahim Ertuğrul; 04.03. Department of Molecular Biology and Genetics; 04. Faculty of Science; 01. Izmir Institute of TechnologyPhysiological responses were investigated in two cotton cultivars grown at various concentrations of sodium chloride (NaCl) in order to determine the degree of the tolerance of the cultivars to salt stress and understand the physiological responses with respect to utilization of mineral nutrients. After germination of the seeds of cotton cultivars, they were transferred into standard pots with 210 g sterilized compost and watered with 30 ml Hoagland’s solution containing different concentrations (0, 50, 100, 200, and 400 mM) of NaCl at two-day intervals for 3 months. Growth parameters were measured and the mineral nutrient analyses were done using inductively coupled plasma optical emission spectrometry (ICP-OES, Thermo Fisher Scientific, Waltman, MA). It was observed that plant growth and mineral nutritional status of both cultivars were altered extensively in those grown with NaCl. Excess NaCl reduces the concentrations of certain mineral nutrients and increases that of others, the patterns depending on the mineral nutrient and the plant part and varieties being compared to the control.Article Citation - WoS: 16Citation - Scopus: 16Screening of Damage Induced by Lead (pb) in Rye (secale Cereale L.) – a Genetic and Physiological Approach(Taylor and Francis Ltd., 2016) Özyigit, İbrahim İlker; Doğan, İlhan; İğdelioğlu, Sezen; Filiz, Ertuğrul; Karadeniz, Sedat; Uzunova, Zeynep; 04.03. Department of Molecular Biology and Genetics; 04. Faculty of Science; 01. Izmir Institute of TechnologyThe fields in which lead (Pb) finds application in the modern world have increased dramatically in recent years. As a consequence of this intensive utilization of Pb, its toxicity tends to pose more and more environmental problems. The aim of this study was to evaluate the genotoxic potential of Pb and to characterize some physiological parameters in Secale cereale under Pb stress. Plants were subjected to different exposure levels of Pb (0, 100, 200 and 400 µmol/L) for two weeks. At the end of the experimental period, the effects of Pb exposure on the photosynthetic pigments content (chlorophyll a and b, total chlorophyll, chlorophyll a/b and carotenoids) and genetic material of S. cereale were studied. To evaluate the genotoxic effect of Pb, random amplified polymorphic DNA – polymerase chain reaction (RAPD-PCR) was employed. The obtained results showed alteration in the photosynthetic pigments content and RAPD-PCR profiles of S. cereale grown in the presence of Pb. The alterations in the RAPD-PCR profiles following Pb treatments appeared to be losses of normal bands and occurrences of new bands compared to unexposed plantlets. Overall, the content of chlorophyll a, chlorophyll b, total chlorophyll and carotenoids decreased by 6.68%, 6.08%, 2.89% and 8.57%, respectively, under severe Pb stress (400 µmol/L).Article Citation - WoS: 18Citation - Scopus: 20Assessment of Cd-Induced Genotoxic Damage in Urtica Pilulifera L. Using Rapd-Pcr Analysis(Taylor and Francis Ltd., 2016) Doğan, İlhan; Doğan, İlhan; Tombuloğlu, Güzin; Sakçalı, Mehmet Serdal; Tombuloğlu, Hüseyin; 04.03. Department of Molecular Biology and Genetics; 04. Faculty of Science; 01. Izmir Institute of TechnologyPlants can be used as biological indicators in assessing the damage done by bioaccumulation of heavy metals and their negative impact on the environment. In the present research, Roman nettle (Urtica pilulifera L.) was employed as a bioindicator for cadmium (Cd) pollution. The comparisons between unexposed and exposed plant samples revealed inhibition of the root growth (∼25.96% and ∼45.92% after treatment with 100 and 200 µmol/L Cd concentrations, respectively), reduction in the total soluble protein quantities (∼53.92% and ∼66.29% after treatment with 100 and 200 µmol/L Cd concentrations, respectively) and a gradual genomic instability when the Cd concentrations were increased. The results indicated that alterations in randomly amplified polymorphic DNA (RAPD) profiles, following the Cd treatments, included normal band losses and emergence of new bands, when compared to the controls. Also, the obtained data from F1 plants, utilized for analysis of genotoxicity, revealed that DNA alterations, occurring in parent plants due to Cd pollution, were transmitted to the next generation.Article Citation - WoS: 22Citation - Scopus: 25Influence of Aluminum on Mineral Nutrient Uptake and Accumulation in Urtica Pilulifera L.(Taylor and Francis Ltd., 2014) Doğan, İlhan; Doğan, İlhan; Demir, Göksel; 04.03. Department of Molecular Biology and Genetics; 04. Faculty of Science; 01. Izmir Institute of TechnologyPollutants can have detrimental effects on living organisms. They can cause toxicity, damaging cells, tissues and organs because of their high concentrations or activities. Plants provide a useful system for screening and monitoring environmental pollutants. Among pollutants, aluminum is considered as a primary growth limiting factor for plants resulting in decreased plant growth and development. Although considered to be a non-essential and highly toxic metal ion for growth and development, aluminum (Al) is easily absorbed by plants. Urticaceae family members have high nutrient requirements demonstrated by leaves containing high levels of calcium (Ca), iron (Fe), magnesium (Mg), and nitrogen (N). Urtica pilulifera is one of the important traditional medicinal plants in Turkey. In this study, U. pilulifera was used as a bioindicator to investigate the possible differences in the absorption and accumulation of mineral nutrients at different levels of the Al exposure and examine the mineral nutrition composition of U. pilulifera under Al stress. Also, some growth parameters (leaf-stem fresh and dry weights, root dry weights, stem lengths and leaf surface area) were investigated. U. pilulifera seedlings were grown for two months in growth-room conditions and watered with spiked Hoagland solution, which contained 0, 100, and 200 μM aluminium chloride (AlCl3). It was observed that macro- and micro-nutritional status of roots and leaves was altered by Al exposure. The concentrations of some macro- and micronutrients were reduced while concentrations of others were increased by excess of Al. Some macro- and micronutrients were increased at low level of Al whereas reductions were observed at high level of Al, and vice versa. The patterns were dependent on the macro- or micronutrient and the plant part.