PubMed İndeksli Yayınlar Koleksiyonu / PubMed Indexed Publications Collection
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Article Citation - WoS: 54Citation - Scopus: 64Bioactive Fish Scale Incorporated Chitosan Biocomposite Scaffolds for Bone Tissue Engineering(Elsevier Ltd., 2019) Kara, Aylin; Tamburacı, Sedef; Tıhmınlıoğlu, Funda; Havıtçıoğlu, HasanRecently, biologically active natural macromolecules have come into prominence to be used as potential materials in scaffold design due to their unique characteristics which can mimic the human tissue structure with their physical and chemical similarity. Among them, fish scale (FS) is a biologically active material with its structural similarity to bone tissue due to including type I collagen and hydroxyapatite and also have distinctive collagen arrangement. In the present study, it is aimed to design a novel composite scaffold with FS incorporation into chitosan (CH) matrix for bone tissue regeneration. Therefore, two biological macromolecules, fish scale and chitosan, were combined to produce bio-composite scaffold. First, FS were decellularized with the chemical method and disrupted physically as microparticles (100 in), followed by dispersal in CH with ultrasonic homogenisation, CH/FS scaffolds were fabricated by lyophilization technique. Scaffolds were characterized physically, chemically, mechanically, and morphologically. SEM and porosity results showed that CH/FS scaffolds have uniform pore structure showing high porosity. Mechanical properties and degradation rate are enhanced with increasing FS content. In vitro cytotoxicity, proliferation and osteogenic activity of the scaffolds were evaluated with SaOS-2 cell line. CH/FS scaffolds did not show any cytotoxicity effect and the cells were gradually proliferated during culture period. Cell viability results showed that, FS microparticles had a proliferative effect on SaOS-2 cells when compared to control group. ALP activity and biomineralization studies indicated that FS micro particle reinforcement increased osteogenic activity during culture period. As a biological macromolecule with unique characteristics, FS was found as cytocompatible and provided promising effects as reinforcement agents for polymeric scaffolds. In conclusion, fabricated CH/FS bio-composites showed potential for bone tissue engineering applications. (C) 2019 Elsevier B.V. All rights reserved.Article Citation - WoS: 24Citation - Scopus: 26Self-Assembly Behavior of the Keratose Proteins Extracted From Oxidized Ovis Aries Wool Fibers(Elsevier Ltd., 2019) Pakkaner, Efecan; Yalçın, Damla; Uysal, Berk; Top, AybenWater soluble keratose proteins were obtained from an Ovis Aries wool using peracetic acid oxidation. The wool samples and the extracted keratose proteins were characterized by using FTIR, XRD, SEM and TGA techniques. Fractions of alpha-keratose (MW = 43-53 kDa) along with protein species with molecular weights between 23 kDa and 33 kDa were identified in the SDS-PAGE analysis result of the extracted protein mixture. DLS and AFM experiments indicated that self-assembled globular nanoparticles with diameters between 15 nm and 100 nm formed at 5 mg/ml keratose concentration. On the other hand, upon incubation of 10 w % keratose solutions at 37 degrees C and 50 degrees C, interconnected keratose hydrogels with respective storage modulus (G') values of 0.17 +/- 0.03 kPa and 3.7 +/- 0.5 kPa were obtained. It was shown that the keratose hydrogel prepared at 37 degrees C supported L929 mouse fibroblast cell proliferation which suggested that these keratose hydrogels could be promising candidates in soft tissue engineering applications. (C) 2018 Elsevier B.V. All rights reserved.Article Citation - WoS: 15Citation - Scopus: 19Brominated Flame Retardants in a Computer Technical Service: Indoor Air Gas Phase, Submicron (pm1) and Coarse (pm10) Particles, Associated Inhalation Exposure, and Settled Dust(Elsevier Ltd., 2019) Genişoğlu, Mesut; Sofuoğlu, Aysun; Kurt Karakuş, Perihan Binnur; Birgül, Aşkın; Sofuoğlu, Sait CemilBrominated flame retardants (BFRs) are found in multi-media indoors, therefore, may pose serious risks to human health. This study investigated the occurrence of BFRs in particulate matter (PM1 and PM10) and gas phase by active and passive sampling, and settled dust to estimate potential exposure in a computer technical service. Polybrominated diphenyl ethers (PBDEs) and their alternatives (novel BFRs, NBFRs) were studied. PM and gas phase were collected on glass fiber filters and polyurethane foam plugs, respectively, and analyzed with a GC/MS after extraction, clean-up, and concentration. Inhalation exposure of the staff was estimated based on the measured concentrations using Monte Carlo simulation. BDE-209 was the dominating PBDE congener in all media while bis(2-ethylhexyl)-3,4,5,6-tetrabromophthalate and 1,2-bis(2,4,6-tribromophenoxy)ethane were those of NBFRs. Submicron particulate matter (PM1) BFR levels constituted about one half of the PM10-associated concentrations, while average PM10 mass concentration (69.9 μg m−3) was nine times that of PM1 (7.73 μg m−3). Calculated log10 dust-gas and PM-gas partitioning coefficients ranged from −5.03 to −2.10, −2.21 to −0.55, and −2.26 to −1.04 for settled dust, PM10, and PM1, respectively. The indoor/outdoor concentration ratios were >1 for all compounds indicating the strength of indoor sources in the service. The estimated potential inhalation exposures, for future chronic-toxic and carcinogenic risk assessments, indicated that the levels of gas-phase and PM1-associated exposures were similar at approximately one half of PM10-associated levels. Results of this study indicate that the occurrence of BFRs in all studied media should be taken into consideration for occupational health mitigation efforts.Article Citation - WoS: 34Citation - Scopus: 35Development of High Flux Nanofiltration Membranes Through Single Bilayer Polyethyleneimine/Alginate Deposition(Elsevier Ltd., 2019) Tekinalp, Önder; Alsoy Altınkaya, SacideThe aim of this study is to prepare high flux, stable, antifouling nanofiltration membranes through single bilayer polyelectrolyte deposition. To this end, a tight ultrafiltration support membrane was prepared from a polysulfone/sulfonated polyethersulfone blend. Deposition of a polyethyleneimine and alginate pair on this support has reduced the molecular weight cut off from 6 kDa to below 1 kDa. The pure water permeability and polyethylene glycol 1000 rejection of the coated membrane were found to be 15.5 ± 0.3 L/m2·h·bar and 90 ± 0.6%, respectively, by setting the deposition pH for each layer to 8 and the ionic strengths to 0.5 M and 0 M. This membrane has exhibited significantly higher permeability than commercial membranes with the same molecular weight cut off, retaining 98% of the initial flux during 15 h filtration of bovine serum albumine. In addition, the membrane has been able to completely remove anionic dyes from aqueous solution by showing 99.9% retentions to Reactive red 141, Brilliant blue G and Congo red with a 2 bar transmembrane pressure. High flux and membrane stability in acidic and salty environments have been achieved when deposition conditions favor high adsorption levels for the first layer and strong ionic cross-linking between the carboxyl group on the alginate and the amine groups on the polyethyleneimineArticle Citation - WoS: 15Citation - Scopus: 13Phase Behavior of Dspc/Peg40st Mixtures at Higher Emulsifier Contents(Elsevier Ltd., 2018) Kılıç, Sevgi; Bölükçü, Elif ŞenizPhase behaviors of 1,2-Distearoyl-sn-glycero-3-phosphocholine (DSPC) and polyoxyethylene(40)stearate (PEG40St) were investigated with Langmuir monolayer isotherms and Brewster angle microscopy (BAM) imaging at DSPC/PEG40St molar ratios ranging from 9:1 to 5:5. Two plateaus were found in the Langmuir isotherms which were relatively shorter for the 9:1 mixture and extended significantly by increasing the PEG40St content, indicating that the PEG40St squeezed out whereas more emulsifier retained in the monolayer at higher PEG40St contents. A strong hysteresis was observed when the mixed monolayers were subjected to compression-expansion cycles. The degree of hysteresis for the first cycles also increased with increasing PEG40St content in the monolayer. Gray scale intensities in the Brewster angle microscopy images were determined for pure DSPC and pure PEG40St and a scale was established to better interpret the morphologies for the mixtures. Bud and vessels formed during the PEG40St squeezed out upon compression. Upon expansion, PEG40St and DSPC is reappeared on the monolayer. When considered BAM images together with the Langmuir isotherm, PEG40St molecules were found to be well distributed within the DSPC molecules at lower DSPC/PEG40St mole ratios and mostly phase separated at higher mole ratios. It was concluded that higher PEG40St content would be advantageous for the design of an efficient and cheaper ultrasound contrast agents.Article Citation - WoS: 51Citation - Scopus: 60Biosilica Incorporated 3d Porous Scaffolds for Bone Tissue Engineering Applications(Elsevier Ltd., 2018) Tamburacı, Sedef; Tıhmınlıoğlu, FundaAs a natural and abundant silica mineral, diatomite particles (SiO2-nH2O) have been used in several areas such as filtration, photonics, sound and heat insulation, filler material and drug delivery due to its abundance, inexpensive cost, unique morphology and porous structure. But up to date, diatomite incorporated silica based scaffolds have not been used for bone tissue engineering applications. In the present study, the goal was to combine the useful biomaterial properties of both chitosan and diatomite as biocomposite organic/inorganic biomaterial for bone tissue engineering applications and optimize the silica content of the composites in order to obtain optimum morphological structure, high mechanical properties, enlarged surface area and enhanced cell proliferation. The effect of silica loading on the mechanical, morphological, chemical, and surface properties, wettability and biocompatibility of composite scaffolds were investigated. In addition, in vitro cytotoxicity and cellular activities including cell proliferation, ALP activity and biomineralization were investigated in order to determine biological activity of the composite scaffolds. Diatomite particles lead to enhancement in the water uptake capacity of scaffolds. Chitosan-silica composites exhibited 82–90% porosity. Wet chitosan-silica composite scaffolds exhibited higher compression moduli when compared to pure chitosan scaffold in the range of 67.3–90.1 kPa. Average pore size range of chitosan-diatomite composite scaffolds was obtained as 218-319 μm. In vitro results indicated that chitosan-diatomite composites did not show any cytotoxic effect on 3T3, MG-63 and Saos-2 cell lines. Scaffolds were found to be favorable for osteoblast proliferation. Diatomite incorporation showed promising effects on enhancing ALP activity as well as mineral formation on scaffold surface. Thus, the prepared scaffolds in this study can be considered prospective material for bone tissue engineering applications.Article Citation - WoS: 91Citation - Scopus: 95Source Apportionment and Carcinogenic Risk Assessment of Passive Air Sampler-Derived Pahs and Pcbs in a Heavily Industrialized Region(Elsevier Ltd., 2018) Çetin, Banu; Yurdakul, Sema; Güngörmüş, Elif; Öztürk, Fatma; Sofuoğlu, Sait CemilCancer has become the primary reason of deaths in Dilovasi probably due to its location with unique topography under the influence of heavy industrialization and traffic. In this study, possible sources and carcinogenic health risks of PAHs and PCBs were investigated in Dilovasi region by Positive Matrix Factorization (PMF) and the USEPA approach, respectively. PAHs and PCBs were measured monthly for a whole year at 23 sampling sites using PUF disk passive samplers. Average ambient air concentrations were found as 285 ± 431 ng/m 3 and 4152 ± 6072 pg/m 3 , for Σ 15 PAH and Σ 41 PCB, respectively. PAH concentrations increased with decreasing temperature especially at urban sites, indicating the impact of residential heating in addition to industrial activities and traffic. On the other hand, PCB concentrations mostly increased with temperature probably due to enhanced volatilization from their sources. Possible sources of PAHs were found as emissions of diesel and gasoline vehicles, biomass and coal combustion, iron and steel industry, and unburned petroleum/petroleum products, whereas iron-steel production, coal and biomass burning, technical PCB mixtures, and industrial emissions were identified for PCBs. The mean carcinogenic risk associated with inhalation exposure to PAHs and PCBs were estimated to be >10 −6 and >10 −5 , respectively, at all sampling points, while the 95th percentile was >10 −5 at 15 of 23 and >10 −4 at 8 of 23 sampling locations, respectively. Probabilistic assessment showed, especially for PCBs, that a majority of Dilovasi population face significant health risks. The higher risks due to PCBs further indicated that PCBs and possibly other pollutants originating from the same sources such as PBDEs and PCNs may be an important issue for the region.Article Citation - WoS: 98Citation - Scopus: 118Organophosphate Ester (opes) Flame Retardants and Plasticizers in Air and Soil From a Highly Industrialized City in Turkey(Elsevier Ltd., 2018) Kurt Karakuş, Perihan Binnur; Alegria, Henry; Birgül, Aşkın; Güngörmüş, Elif; Jantunen, LiisaPassive air samples were collected at eight sites in Bursa, Turkey during five sampling periods between February–December 2014. Locations encompassed urban, suburban, industrial, rural and background environments. Soil samples (n = 8) were collected at each site during February 2014. Six OPEs were detected in samples: tris(2-chloroethyl) phosphate (TCEP), tris(chloropropyl) phosphate (TCPP), triphenyl phosphate (TPHP), tris(2-butoxyethyl) phosphate (TBOEP), tris(2-ethylhexyl) phosphate (TEHP), and tris(2-isopropylphenyl) phosphate (T2iPPP). Frequency of detection in air samples was TCPP and TPHP (100%) > TBOEP (88%) > TCEP (85%) > TEHP (78%) > T2iPPP (20%). Total OPEs in air per site by sampling period (excluding non-detects) ranged from 529 to 19,139 pg/m3. In soil, total OPEs ranged from 38 to 468 ng/g dw. In air, alkylated OPEs dominated followed by halogenated and aryl OPEs. In air, annual mean concentrations were TBOEP > TCPP > TPHP > T2iPPP > TEHP > TCEP. In soils, alkylated OPEs were dominant at six sites and chlorinated OPEs at two sites. A comparison of OPE profiles between air and soil suggests that soils may be partly a source of OPEs to air. Mean concentrations in air were not directly proportional to temperature, and there were differences between alkylated compared to halogenated and aryl OPEs. In air, total and alkylated OPEs levels were fairly uniform, whereas more variability was found for the halogenated and aryl compounds. The relative contribution to total OPEs decreases for alkylated OPEs and increases for halogenated OPEs in samples going from background to suburban to urban and industrial sites. Levels of individual OPEs were all positively correlated between air and soils. In air, correlations between individual compounds were weak to moderate and were only statistically significant for TBOEP and TPHP. In soils, correlations were generally stronger and statistically significant only for TPHP and T2iPPP.Article Citation - WoS: 62Citation - Scopus: 72Diatomite Reinforced Chitosan Composite Membrane as Potential Scaffold for Guided Bone Regeneration(Elsevier Ltd., 2017) Tamburacı, Sedef; Tıhmınlıoğlu, FundaIn this study, natural silica source, diatomite, incorporated novel chitosan based composite membranes were fabricated and characterized for bone tissue engineering applications as possible bone regeneration membrane. The effect of diatomite loading on the mechanical, morphological, chemical, thermal and surface properties, wettability and in vitro cytotoxicity and cell proliferation on of composite membranes were investigated and observed by tensile test, atomic force microscopy (AFM), Fourier transform infrared spectroscopy (FTIR), thermal gravimetric analysis (TGA), protein adsorption assay, air/water contact angle analysis and WST-1 respectively. Swelling studies were also performed by water absorption capacity determination. Results showed that incorporation of diatomite to the chitosan matrix increased the surface roughness, swelling capacity and tensile modulus of membranes. An increase of about 52% in Young's modulus was achieved for 10 wt% diatomite composite membranes compared with chitosan membranes. High cell viability results were obtained with indirect extraction method. Besides, in vitro cell proliferation and ALP activity results showed that diatom incorporation significantly increased the ALP activity of Saos-2 cells cultured on chitosan membranes. The novel composite membranes prepared in the present study with tunable properties can be considered as a potential candidate as a scaffold in view of its enhanced physical & chemical properties as well as biological activities for bone tissue engineering applications.Article Citation - WoS: 96Citation - Scopus: 113Hypericum Perforatum Incorporated Chitosan Films as Potential Bioactive Wound Dressing Material(Elsevier Ltd., 2017) Güneş, Seda; Tıhmınlıoğlu, FundaRecent studies in wound dressing applications offer new therapies and promote wound healing process. The aim of this study was to develop Hypericum perforatum (St John's Wort) oil incorporated chitosan films for wound dressing applications. H. perforatum oil as a potential therapeutic agent was encapsulated in chitosan film to achieve a better wound dressing material. Oil incorporated chitosan films were successfully prepared by solvent casting method in different oil concentrations (0.25–1.5%v/v). Water vapor permeability (WVP), mechanical test, swelling behavior and surface hydrophobicity were performed in order to characterize the prepared films. Antimicrobial test was performed by disc diffusion method and the growth inhibition effects of the films including different amount of H. perforatum oil were investigated on Escherichia coli and Staphylococcus aureus. WVP increased with oil incorporation and the highest value was obtained for 0.25% oil concentration.The highest strain value was obtained in 0.25% oil content films although tensile stress decreased with increasing oil content. H. perforatum oil incorporated films had antimicrobial effect on both microorganisms. Chitosan based films had no cytotoxic effects on NIH3T3fibroblast cells and provided a good surface for cell attachment and proliferation. The results showed that the H. perforatum incorporated chitosan films seems to be a potential and novel biomaterial for wound healing applications.