The Effects of Naphthoquinones Isolated From Onosma Species on Dna Topoisomerases and Their Cytotoxic Properties

dc.contributor.advisor Bedir, Erdal
dc.contributor.advisor Zencir, Sevil
dc.contributor.author Güzel, Özge
dc.contributor.author Bedir, Erdal
dc.date.accessioned 2018-11-22T11:37:37Z
dc.date.available 2018-11-22T11:37:37Z
dc.date.issued 2018
dc.description Thesis (Master)--Izmir Institute of Technology, Biotechnology, Izmir, 2018 en_US
dc.description Full text release delayed at author's request until 2019.01.30 en_US
dc.description Includes bibliographical references (leaves: 93-100) en_US
dc.description Text in English; Abstract: Turkish and English en_US
dc.description.abstract Onosma L. genus (Boraginaceae) comprises of 230 species that is represented by 102 species and 108 taxa in the flora of Turkey. As 50% of the genus is endemic, Anatolia can be considered as the gene center of Onosma species. Phytochemical investigations performed on Onosma genus have led to the identification of various naphtoquinones, alkaloids and phenolic constituents. Biological activity studies on naphthoquinones demonstrated antimicrobial and wound-healing properties as well as cytotoxicity. In this thesis, Onosma taurica var. taurica and O. mollis were taken into cytotoxic activity-guided isolation studies, by MTT using seven human cancer cell lines (DU145, Capan-1, HCC-1937, MCF-7, HeLa, HEPG2, A-459) and a normal cell line (MRC-5), to isolate their bioactive compounds. Additionally, the isolation studies were guided by enzyme inhibition tests towards human Topoisomerases I and II. Six compounds were isolated using chromatographic methods, and the structures of the five of them were elucidated by spectral methods, (1D-, 2D NMR and HR-ESI-MS) as acetylshikonin, shikonin, β-hydroxyisovalerylshikonin, β,β-dimethylacrylshikonin and deoxyshikonin. The isolated compounds showed prominent cytotoxicity with IC50 values ranging from 1.83 to 25 M. β,β-dimethylacrylshikonin was found to be the most cytotoxic compound (IC50: 1.84 μM versus HCC-1937), whereas β-hydroxyisovalerylshikonin on Topoisomerase I and II (each at 25 M dose) exhibited strong inhibitory effects. en_US
dc.description.abstract Onosma L. (Boraginaceae) dünya üzerinde 230 türü bulunan ve Türkiye florasında 102 tür ve 108 takson ile temsil edilen bir cinstir. Ülkemizdeki türlerin neredeyse %50’si endemiktir (48 tür), bu nedenle Anadolu’nun Onosma türlerinin gen merkezi olduğu söylenebilir. Onosma cinsi üzerinde gerçekleştirilen fitokimyasal araştırmalar çeşitli naftakinon, alkaloitler ve fenolik bileşiklerin tanımlanmasına olanak sağlamıştır. Onosma türlerinden elde edilen naftakinon türevleri için antimikrobiyal (Ozgen vd., 2004; Pavol vd., 2008) ve yara iyi edici etki ile birlikte sitotoksisite rapor edilmiştir. Bu çalışmada, O. mollis ve O. taurica var. taurica bitkileri MTT yöntemi ile 8 adet tümörjenik (DU145, Capan-1, HCC-1937, MCF-7, HeLa, HEPG2, A-459) ve 1 tümörjenik olmayan (MRC5) hücre hatlarına karşı sitotoksisiteleri yönünden taranarak biyoaktif moleküllerin elde edilmesi için sitotoksik aktivite rehberli izolasyon çalışmasına alınmıştır. Bu duruma ek olarak, DNA Topoizomerazları I ve II enzimleri üzerindeki inbitisyon etkileri incelenmiştir. Farklı kromotografik yöntemlerle elde edilen altı bileşikten beş tanesinin yapıları spectral yöntemlerle (1D-, 2D NMR ve HR-ESI-MS) aydınlatılmış ve asetilşikonin, şikonin, β-hidroksiizovalerilşikonin, β, β-dimetilakrilşikonin ve deoksişikonin olduğu saptanmıştır. İzole edilmiş bileşikler, 1.83 ile 25 μM arasında değişen IC50 değerleri ile belirgin sitotoksisite göstermiştir. β, β-dimetilakrilşikonin en aktif bileşik olarak (HCC-1937 üzerinde IC50: 1.84 μM) bulunmuştur. Topoizomeraz inhibisyon testleri ile ilgili olarak, β-hidroksiizovalerilşikonin 25 M konsantrasyonda Topoizomeraz I ve II enzimleri üzerinde güçlü inhibisyon etkisi göstermiştir. en_US
dc.description.sponsorship TUBITAK project “116Z463” and BAP Project “2017IYTE64” en_US
dc.format.extent xivi, 100 leaves
dc.identifier.citation Güzel, Ö. (2018). The effects of naphthoquinones isolated from Onosma species on DNA topoisomerases and their cytotoxic properties. Unpublished master's thesis, İzmir Institute of Technology, İzmir, Turkey en_US
dc.identifier.uri https://hdl.handle.net/11147/7006
dc.language.iso en en_US
dc.publisher Izmir Institute of Technology en_US
dc.relation info:eu-repo/grantAgreement/TUBITAK/KBAG/116Z463 en_US
dc.rights info:eu-repo/semantics/openAccess en_US
dc.subject Onosma L. en_US
dc.subject Boraginaceae en_US
dc.subject Cytotoxic activity en_US
dc.subject DNA Topoisomerase en_US
dc.subject Naphthoquinones en_US
dc.title The Effects of Naphthoquinones Isolated From Onosma Species on Dna Topoisomerases and Their Cytotoxic Properties en_US
dc.title.alternative Onosma Türlerinden İzole Edilen Naftokinonların Dna Topoizomeraz Üzerine Etkileri ve Stotoksik Özellikleri en_US
dc.type Master Thesis en_US
dspace.entity.type Publication
gdc.author.institutional Güzel, Özge
gdc.coar.access open access
gdc.coar.type text::thesis::master thesis
gdc.description.department Thesis (Master)--İzmir Institute of Technology, Bioengineering en_US
gdc.description.publicationcategory Tez en_US
relation.isAuthorOfPublication.latestForDiscovery 461a570d-2493-4349-b634-a876ced8cd22
relation.isOrgUnitOfPublication.latestForDiscovery 9af2b05f-28ac-4015-8abe-a4dfe192da5e

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