Characterization of the Human Sialidase Neu4 Gene Promoter

dc.contributor.author Seyrantepe, Volkan
dc.contributor.author Delman, Murat
dc.date.accessioned 2021-01-24T18:33:54Z
dc.date.available 2021-01-24T18:33:54Z
dc.date.issued 2014
dc.description.abstract There are 4 different sialidases that have been described in humans: lysosomal (Neu1), cytoplasmic (Neu2), plasma membrane (Neu3), and lysosomal/mitochondrial (Neu4). Previously, we have shown that Neu4 has a broad substrate specificity and is active against glyco-conjugates, including GM2 ganglioside, at the acidic pH of 3.2. An overexpression of Neu4 in transfected neuroglia cells from a Tay-Sachs patient shows a clearance of accumulated GM2, indicating the biological importance of Neu4. In this paper, we aimed to characterize a minimal promoter region of the human Neu4 gene in order to understand the molecular mechanism regulating its expression. We cloned 7 different DNA fragments from the human Neu4 promoter region into luciferase expression vectors for a reporter assay and also performed an electrophoretic mobility shift assay to demonstrate the binding of transcription factors. We demonstrated that -187 bp upstream of the Neu4 gene is a minimal promoter region for controlling transcription from the human Neu4 gene. The electrophoretic mobility shift assay showed that the minimal promoter region recruits a c-myc transcription factor, which might be responsible for regulation of Neu4 gene transcription. The data we obtained might be useful to discover small molecules, which control selective high expression of the human Neu4 gene, resulting in the normal morphological phenotype in the lysosomes of Tay-Sachs patients. en_US
dc.identifier.doi 10.3906/biy-1401-63
dc.identifier.issn 1300-0152
dc.identifier.issn 1303-6092
dc.identifier.scopus 2-s2.0-84906860458
dc.identifier.uri https://hdl.handle.net/11147/10328
dc.identifier.uri https://search.trdizin.gov.tr/yayin/detay/163072
dc.identifier.uri https://doi.org/10.3906/biy-1401-63
dc.language.iso en en_US
dc.publisher TÜBİTAK - Türkiye Bilimsel ve Teknolojik Araştırma Kurumu en_US
dc.relation.ispartof Turkish Journal of Biology en_US
dc.rights info:eu-repo/semantics/openAccess en_US
dc.subject Sialidases en_US
dc.subject Protein-DNA interaction en_US
dc.subject Transcription factors en_US
dc.title Characterization of the Human Sialidase Neu4 Gene Promoter en_US
dc.type Article en_US
dspace.entity.type Publication
gdc.author.institutional Seyrantepe, Volkan
gdc.bip.impulseclass C5
gdc.bip.influenceclass C5
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gdc.coar.access open access
gdc.coar.type text::journal::journal article
gdc.collaboration.industrial false
gdc.description.department İzmir Institute of Technology. Molecular Biology and Genetics en_US
gdc.description.endpage 580 en_US
gdc.description.issue 5 en_US
gdc.description.publicationcategory Makale - Uluslararası Hakemli Dergi - Kurum Öğretim Elemanı en_US
gdc.description.scopusquality Q4
gdc.description.startpage 574 en_US
gdc.description.volume 38 en_US
gdc.description.wosquality Q3
gdc.identifier.openalex W1973630989
gdc.identifier.trdizinid 163072
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gdc.oaire.keywords Biyoloji
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gdc.oaire.sciencefields 0301 basic medicine
gdc.oaire.sciencefields 0303 health sciences
gdc.oaire.sciencefields 03 medical and health sciences
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