Boron Stress Signal Is Transmitted Through the Tor Pathway
| dc.contributor.author | Uluışık, İrem | |
| dc.contributor.author | Koç, Ahmet | |
| dc.date.accessioned | 2023-07-27T19:49:56Z | |
| dc.date.available | 2023-07-27T19:49:56Z | |
| dc.date.issued | 2023 | |
| dc.description.abstract | Although boron is an essential element for many organisms, an excess amount of it can cause toxicity, and the mechanism behind this toxicity is not yet fully understood. The Gcn4 transcription factor plays a crucial role in the boron stress response by directly activating the expression of the boron efflux pump Atr1. More than a dozen transcription factors and multiple cell signaling pathways have roles in regulating the Gcn4 transcription factor under various circumstances. However, it is unknown which pathways or factors mediate boron signaling to Gcn4. Using the yeast Saccharomyces cerevisiae as a model, we analyzed the factors that converge on the Gcn4 transcription factor to assess their possible roles in boron stress signaling. Our findings show that the GCN system is activated by uncharged tRNA stress in response to boron treatment and that GCN1, which plays a role in transferring uncharged tRNAs to Gcn2, is necessary for the kinase activity of Gcn2. The SNF and PKA pathways were not involved in mediating boron stress, even though they interact with Gcn4. Mutations in TOR pathway genes, such as GLN3 and TOR1, abolished Gcn4 and ATR1 activation in response to boric acid treatment. Therefore, our study suggests that the TOR pathway must be functional to form a proper response against boric acid stress. | en_US |
| dc.description.sponsorship | Acknowledgments We would like to express our gratitude to C;ag?lar Karakaya for his assistance in this study. This work was supported by TUBITAK grant no. 110T917 (AK) . | en_US |
| dc.identifier.doi | 10.1016/j.jtemb.2023.127222 | |
| dc.identifier.issn | 0946-672X | |
| dc.identifier.issn | 1878-3252 | |
| dc.identifier.scopus | 2-s2.0-85160618379 | |
| dc.identifier.uri | https://doi.org/10.1016/j.jtemb.2023.127222 | |
| dc.identifier.uri | https://hdl.handle.net/11147/13589 | |
| dc.language.iso | en | en_US |
| dc.publisher | Elsevier | en_US |
| dc.relation.ispartof | Journal of Trace Elements in Medicine and Biology | en_US |
| dc.rights | info:eu-repo/semantics/closedAccess | en_US |
| dc.subject | Boric acid | en_US |
| dc.subject | Boron stress | en_US |
| dc.subject | Yeast | en_US |
| dc.subject | General amino acid control | en_US |
| dc.subject | Tor pathway | en_US |
| dc.title | Boron Stress Signal Is Transmitted Through the Tor Pathway | en_US |
| dc.type | Article | en_US |
| dspace.entity.type | Publication | |
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| gdc.coar.type | text::journal::journal article | |
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| gdc.description.department | İzmir Institute of Technology. Molecular Biology and Genetics | en_US |
| gdc.description.publicationcategory | Makale - Uluslararası Hakemli Dergi - Kurum Öğretim Elemanı | en_US |
| gdc.description.scopusquality | Q2 | |
| gdc.description.volume | 79 | en_US |
| gdc.description.wosquality | Q2 | |
| gdc.identifier.openalex | W4377990751 | |
| gdc.identifier.pmid | 37270859 | |
| gdc.identifier.wos | WOS:001012726100001 | |
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| gdc.oaire.keywords | Target | |
| gdc.oaire.keywords | Growth | |
| gdc.oaire.keywords | DNA-Binding proteins | |
| gdc.oaire.keywords | Signal transduction | |
| gdc.oaire.keywords | Saccharomyces cerevisiae proteins | |
| gdc.oaire.keywords | Real time polymerase chain reaction | |
| gdc.oaire.keywords | Western blotting | |
| gdc.oaire.keywords | Tor pathway | |
| gdc.oaire.keywords | RNA, Transfer | |
| gdc.oaire.keywords | Protein kinases | |
| gdc.oaire.keywords | Gene activation | |
| gdc.oaire.keywords | Regulatory mechanism | |
| gdc.oaire.keywords | Borate | |
| gdc.oaire.keywords | Rhamnogalacturonan II | |
| gdc.oaire.keywords | GLN3 gene | |
| gdc.oaire.keywords | Boric acid | |
| gdc.oaire.keywords | DNA-Binding Proteins | |
| gdc.oaire.keywords | RNA isolation | |
| gdc.oaire.keywords | GCN1 gene | |
| gdc.oaire.keywords | Saccharomyces cerevisiae Proteins | |
| gdc.oaire.keywords | TOR1 gene | |
| gdc.oaire.keywords | Activation | |
| gdc.oaire.keywords | Saccharomyces cerevisiae | |
| gdc.oaire.keywords | Protein phosphorylation | |
| gdc.oaire.keywords | RNA degradation | |
| gdc.oaire.keywords | Acid | |
| gdc.oaire.keywords | Transcription factors | |
| gdc.oaire.keywords | Genetics | |
| gdc.oaire.keywords | Gene mutation | |
| gdc.oaire.keywords | Poncirus Trifoliata | |
| gdc.oaire.keywords | Boron stress | |
| gdc.oaire.keywords | General amino acid control | |
| gdc.oaire.keywords | Boron | |
| gdc.oaire.keywords | Toxicity | |
| gdc.oaire.keywords | Transport mechanisms | |
| gdc.oaire.keywords | Mutational analysis | |
| gdc.oaire.keywords | Yeast | |
| gdc.oaire.keywords | Protein-kinase | |
| gdc.oaire.keywords | Protein biosynthesis | |
| gdc.oaire.keywords | Transfer | |
| gdc.oaire.keywords | Agriculture, Environment & Ecology - Crop Science - Boron | |
| gdc.oaire.keywords | Metabolism | |
| gdc.oaire.keywords | Human cell | |
| gdc.oaire.keywords | Physiological stress | |
| gdc.oaire.keywords | Protein Biosynthesis | |
| gdc.oaire.keywords | RNA | |
| gdc.oaire.keywords | Northern blotting | |
| gdc.oaire.keywords | Gcn2 | |
| gdc.oaire.keywords | Gcn1 | |
| gdc.oaire.keywords | ATR1 gene | |
| gdc.oaire.keywords | Protein synthesis | |
| gdc.oaire.keywords | Controlled study | |
| gdc.oaire.keywords | Protein Kinases | |
| gdc.oaire.keywords | Transcription Factors | |
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