Expression Patterns of M6a Rna Methylation Regulators Under Apoptotic Conditions in Various Human Cancer Cell Lines

dc.contributor.author Alasar, Azime Akçaöz
dc.contributor.author Sağlam, Buket
dc.contributor.author Vatansever, İpek Erdoğan
dc.contributor.author Akgül, Bünyamin
dc.date.accessioned 2024-05-05T14:59:31Z
dc.date.available 2024-05-05T14:59:31Z
dc.date.issued 2024
dc.description.abstract Background/aim: Cancer is a complex disease that involves both genetic and epigenetic factors. While emerging evidence clearly suggests that changes in epitranscriptomics play a crucial role in cancer pathogenesis, a comprehensive understanding of the writers, erasers, and readers of epitranscriptomic processes, particularly under apoptotic conditions remains lacking. The aim of this study was to uncover the changes in the expression of m6A RNA modifiers under apoptotic conditions across various cancer cell lines. Materials and methods: Initially, we quantified the abundance of m6A RNA modifiers in cervical (HeLa and ME180), breast (MCF7 and MDA-MB-231), lung (A549 and H1299), and colon (Caco-2 and HCT116) cancer cell lines using qPCR. Subsequently, we induced apoptosis using cisplatin and tumor necrosis factor-alpha (TNF-α) to activate intrinsic and extrinsic pathways, respectively, and assessed apoptosis rates via flow cytometry. Further, we examined the transcript abundance of m6A RNA modifiers under apoptotic conditions in cervical, breast, and lung cancer cell lines using qPCR. Results: Overall, treatment with cisplatin increased the abundance of m 6A modifiers, whereas TNF-α treatment decreased their expression in cervical, breast, and lung cancer cell lines. Specifically, cisplatin-induced apoptosis, but not TNF-α-mediated apoptosis, resulted in decreased abundance of METTL14 and FTO transcripts. Additionally, cisplatin treatment drastically reduced the abundance of IGF2BP2 and IGF2BP3 readers. Conclusion: These results suggest that the differential response of cancer cells to apoptotic inducers may be partially attributed to the expression of m6A RNA modifiers. en_US
dc.description.sponsorship Türkiye Bilimsel ve Teknolojik Araştırma Kurumu, TÜBİTAK, (217Z234) en_US
dc.identifier.doi 10.55730/1300-0152.2679
dc.identifier.issn 1300-0152
dc.identifier.issn 1303-6092
dc.identifier.scopus 2-s2.0-85186587481
dc.identifier.uri https://doi.org/10.55730/1300-0152.2679
dc.identifier.uri https://search.trdizin.gov.tr/en/yayin/detay/1239498/expression-patterns-of-m6a-rna-methylation-regulators-under-apoptotic-conditions-in-various-human-cancer-cell-lines
dc.identifier.uri https://hdl.handle.net/11147/14402
dc.language.iso en en_US
dc.publisher TUBITAK en_US
dc.relation.ispartof Turkish Journal of Biology en_US
dc.rights info:eu-repo/semantics/openAccess en_US
dc.subject apoptosis en_US
dc.subject cancer en_US
dc.subject cisplatin en_US
dc.subject Epitranscriptomics en_US
dc.subject m<sup>6</sup>A modification en_US
dc.subject TNF-α en_US
dc.title Expression Patterns of M6a Rna Methylation Regulators Under Apoptotic Conditions in Various Human Cancer Cell Lines en_US
dc.type Article en_US
dspace.entity.type Publication
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gdc.bip.impulseclass C5
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gdc.coar.access open access
gdc.coar.type text::journal::journal article
gdc.collaboration.industrial false
gdc.description.department Izmir Institute of Technology en_US
gdc.description.departmenttemp İZMİR YÜKSEK TEKNOLOJİ ENSTİTÜSÜ,İZMİR YÜKSEK TEKNOLOJİ ENSTİTÜSÜ,İZMİR YÜKSEK TEKNOLOJİ ENSTİTÜSÜ,İZMİR YÜKSEK TEKNOLOJİ ENSTİTÜSÜ en_US
gdc.description.endpage 34 en_US
gdc.description.issue 1 en_US
gdc.description.publicationcategory Makale - Ulusal Hakemli Dergi - Kurum Öğretim Elemanı en_US
gdc.description.scopusquality Q4
gdc.description.startpage 24 en_US
gdc.description.volume 48 en_US
gdc.description.wosquality Q3
gdc.identifier.openalex W4392364531
gdc.identifier.pmid 38665783
gdc.identifier.trdizinid 1239498
gdc.identifier.wos WOS:001178934500008
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gdc.oaire.keywords Research Article
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gdc.opencitations.count 0
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