Effect of Mirna Administration on Non-Small Cell Lung Cancer Cells Studied by Cellular Viability Assay and Atr-Ftir Spectroscopy Combined With Multivariate Data-Analysis

dc.contributor.author Dagdeviren, Melih
dc.contributor.author Guler, Gunnur
dc.contributor.author Guler, Egemen Erdem
dc.contributor.author Un, Cemal
dc.contributor.author Karabay-Yavasoglu, Nefise Ulku
dc.date.accessioned 2025-02-05T09:52:48Z
dc.date.available 2025-02-05T09:52:48Z
dc.date.issued 2025
dc.description Karabay Yavasoglu, N.Ulku/0000-0002-7483-0184 en_US
dc.description.abstract MicroRNAs (miRNAs), small non-coding RNAs, play a significant role in the regulation of gene expression by various mechanisms. Some miRNAs such as hsa-miR-145 (mir145), hsa-let-7a-1 (let7), hsa-miR-155 (mir155), and hsa-miR-29b (mir29b) are expressed at low levels in cancers and associated with proliferation, metastasis, invasion and apoptosis. In the current study, we aimed to investigate the effect of selected synthetic miRNAs and their combinations on the non-small cell lung cancer (NSCLC) cells (A549) by following the cell viability profile and alterations in the cellular biomolecules with biophysical features. After administration of commercial miRNAs and their various combinations to A549 cell line, each group was analyzed with cell viability assay and attenuated total reflection-Fourier transform infrared (ATR-FTIR) spectroscopy combined with unsupervised multivariate analysis. Bioinformatics analysis was also performed to detect and to classify the target human genes obtained from the mirDB database. According to the cell viability results, the "mir29b + let7" combination and "mir155" significantly decreased the cancer cell viability whereas the "mir145 + mir29b" and "mir155 + mir145" combinations dramatically increased the cancer cell viability when compared to the control cells. The FTIR data revealed that administration of the "mir155", "mir29b + let7 + mir155", and "mir29b + let7" combinations caused a decrease in the contents of proteins, lipids and nucleic acids in A549 cells. This study suggests that those miRNA combinations might be potential targets for vaccines or miRNA-based therapies that can restore the miRNA activity and thus should be further evaluated to combat lung cancer with miRNA technology. en_US
dc.description.sponsorship Ege University Research Found [15-ILAM-002]; Center for Drug Research and Development and Pharmacokinetic Applications (ARGEFAR) in Ege University en_US
dc.description.sponsorship <BOLD>This work was supported by the Ege University Research Found (Grant number: 15-ILAM-002) . </BOLD> The authors are grateful to the Center for Drug Research and Development and Pharmacokinetic Applications (ARGEFAR) in Ege University for providing the laboratory facilities. en_US
dc.identifier.doi 10.1016/j.microc.2025.112681
dc.identifier.issn 0026-265X
dc.identifier.issn 1095-9149
dc.identifier.scopus 2-s2.0-85214433937
dc.identifier.uri https://doi.org/10.1016/j.microc.2025.112681
dc.language.iso en en_US
dc.publisher Elsevier en_US
dc.relation.ispartof Microchemical Journal
dc.rights info:eu-repo/semantics/closedAccess en_US
dc.subject Microrna en_US
dc.subject A549 Cells en_US
dc.subject Atr-Ftir Spectroscopy en_US
dc.subject Bioinformatics en_US
dc.subject Multivariate Statistical Analysis en_US
dc.subject Principal Component Analysis en_US
dc.title Effect of Mirna Administration on Non-Small Cell Lung Cancer Cells Studied by Cellular Viability Assay and Atr-Ftir Spectroscopy Combined With Multivariate Data-Analysis en_US
dc.type Article en_US
dspace.entity.type Publication
gdc.author.id Karabay Yavasoglu, N.Ulku/0000-0002-7483-0184
gdc.author.wosid Dagdeviren, Melih/Afp-7027-2022
gdc.author.wosid Güler, Günnur/Aah-6852-2021
gdc.author.wosid Yavasoglu, N.Ulku/Afu-9719-2022
gdc.bip.impulseclass C5
gdc.bip.influenceclass C5
gdc.bip.popularityclass C5
gdc.coar.access metadata only access
gdc.coar.type text::journal::journal article
gdc.collaboration.industrial false
gdc.description.department İzmir Institute of Technology en_US
gdc.description.departmenttemp [Dagdeviren, Melih; Un, Cemal; Karabay-Yavasoglu, Nefise Ulku] Ege Univ, Fac Sci, Dept Biol, TR-35040 Izmir, Turkiye; [Dagdeviren, Melih; Karabay-Yavasoglu, Nefise Ulku] Ege Univ, Ctr Drug Res & Dev & Pharmacokinet Applicat, TR-35100 Izmir, Turkiye; [Guler, Gunnur] Izmir Inst Technol, Fac Sci, Dept Phys, Biophys Lab, TR-35430 Izmir, Turkiye; [Guler, Egemen Erdem] Dokuz Eylul Univ, Izmir Biomed & Genome Ctr, TR-35340 Izmir, Turkiye en_US
gdc.description.publicationcategory Makale - Uluslararası Hakemli Dergi - Kurum Öğretim Elemanı en_US
gdc.description.scopusquality Q2
gdc.description.volume 209 en_US
gdc.description.woscitationindex Science Citation Index Expanded
gdc.description.wosquality Q1
gdc.identifier.openalex W4406092165
gdc.identifier.wos WOS:001414729500001
gdc.index.type WoS
gdc.index.type Scopus
gdc.oaire.diamondjournal false
gdc.oaire.impulse 0.0
gdc.oaire.influence 2.635068E-9
gdc.oaire.isgreen false
gdc.oaire.popularity 3.0009937E-9
gdc.oaire.publicfunded false
gdc.openalex.collaboration National
gdc.openalex.fwci 7.09350384
gdc.openalex.normalizedpercentile 0.85
gdc.openalex.toppercent TOP 10%
gdc.opencitations.count 0
gdc.plumx.mendeley 3
gdc.plumx.scopuscites 2
gdc.scopus.citedcount 2
gdc.wos.citedcount 2
relation.isAuthorOfPublication.latestForDiscovery de0f3c8b-a94d-4b18-a590-156fabdab986
relation.isOrgUnitOfPublication.latestForDiscovery 9af2b05f-28ac-4009-8abe-a4dfe192da5e

Files

Original bundle

Now showing 1 - 1 of 1
Loading...
Name:
1-s2.0-S0026265X25000359-main.pdf
Size:
3.96 MB
Format:
Adobe Portable Document Format
Description:
article