Pseudomonas Aeruginosa Presents Multiple Vital Changes in Its Proteome in the Presence of 3-Hydroxyphenylacetic Acid, a Promising Antimicrobial Agent

dc.contributor.author Özdemir, Özgün O.
dc.contributor.author Soyer, Ferda
dc.coverage.doi 10.1021/acsomega.0c00703
dc.date.accessioned 2021-01-24T18:43:13Z
dc.date.available 2021-01-24T18:43:13Z
dc.date.issued 2020
dc.description.abstract Pseudomonas aeruginosa, a widely distributed opportunistic pathogen, is an important threat to human health for causing serious infections worldwide. Due to its antibiotic resistance and virulence factors, it is so difficult to combat this bacterium; thus, new antimicrobial agents are in search. 3-Hydroxyphenylacetic acid (3-HPAA), which is a phenolic acid mostly found in olive oil wastewater, can be a promising candidate with its dose-dependent antimicrobial properties. Elucidating the molecular mechanism of action is crucial for future examinations and the presentation of 3-HPAA as a new agent. In this study, the antimicrobial activity of 3-HPAA on P. aeruginosa and its action mechanism was investigated via shot-gun proteomics. The data, which are available via ProteomeXchange with identifier PXDO16243, were examined by STRING analysis to determine the interaction networks of proteins. KEGG Pathway enrichment analysis via the DAVID bioinformatics tool was also performed to investigate the metabolic pathways that undetected and newly detected groups of the proteins. The results displayed remarkable changes after 3-HPAA exposure in the protein profile of P. aeruginosa related to DNA replication and repair, RNA modifications, ribosomes and proteins, cell envelope, oxidative stress, as well as nutrient availability. 3-HPAA showed its antimicrobial action on P. aeruginosa by affecting multiple bacterial processes; hence, it could be categorized as a multitarget antimicrobial agent. en_US
dc.description.sponsorship Izmir Institute of Technology Research Fund [2014IYTE22] en_US
dc.description.sponsorship The authors thank Prof. Dr. Talat Yalcin for generously providing his expertise and support for LC-ESI-MS/MS and MASCOT analyses. This work was funded by the Izmir Institute of Technology Research Fund (Project #2014IYTE22) to F.S., and a Ph.D. grant to O.O.O. by the Izmir Institute of Technology. The mass spectrometry proteomics data have been deposited to the ProteomeXchange Consortium via the PRIDE<SUP>86,87</SUP> partner repository. en_US
dc.identifier.doi 10.1021/acsomega.0c00703
dc.identifier.issn 2470-1343
dc.identifier.scopus 2-s2.0-85090988898
dc.identifier.uri https://doi.org/10.1021/acsomega.0c00703
dc.identifier.uri https://hdl.handle.net/11147/10450
dc.language.iso en en_US
dc.publisher American Chemical Society en_US
dc.relation.ispartof ACS Omega en_US
dc.rights info:eu-repo/semantics/openAccess en_US
dc.title Pseudomonas Aeruginosa Presents Multiple Vital Changes in Its Proteome in the Presence of 3-Hydroxyphenylacetic Acid, a Promising Antimicrobial Agent en_US
dc.type Article en_US
dspace.entity.type Publication
gdc.author.institutional Özdemir, Özgün O.
gdc.author.institutional Soyer, Ferda
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gdc.coar.access open access
gdc.coar.type text::journal::journal article
gdc.collaboration.industrial false
gdc.description.department İzmir Institute of Technology. Molecular Biology and Genetics en_US
gdc.description.endpage 19951 en_US
gdc.description.issue 32 en_US
gdc.description.publicationcategory Makale - Uluslararası Hakemli Dergi - Kurum Öğretim Elemanı en_US
gdc.description.scopusquality Q1
gdc.description.startpage 19938 en_US
gdc.description.volume 5 en_US
gdc.description.wosquality Q2
gdc.identifier.openalex W3047254368
gdc.identifier.pmid 32832748
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gdc.oaire.keywords Chemistry
gdc.oaire.keywords QD1-999
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gdc.oaire.sciencefields 0301 basic medicine
gdc.oaire.sciencefields 03 medical and health sciences
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gdc.opencitations.count 11
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