Thiol Peroxidase Deficiency Leads To Increased Mutational Load and Decreased Fitness in Saccharomyces Cerevisiae

dc.contributor.author Kaya, Alaattin
dc.contributor.author Lobanov, Alexey V.
dc.contributor.author Gerashchenko, Maxim V.
dc.contributor.author Koren, Amnon
dc.contributor.author Fomenko, Dmitri E.
dc.contributor.author Koç, Ahmet
dc.contributor.author Gladyshev, Vadim N.
dc.coverage.doi 10.1534/genetics.114.169243
dc.date.accessioned 2017-06-13T13:06:24Z
dc.date.available 2017-06-13T13:06:24Z
dc.date.issued 2014
dc.description.abstract Thiol peroxidases are critical enzymes in the redox control of cellular processes that function by reducing low levels of hydroperoxides and regulating redox signaling. These proteins were also shown to regulate genome stability, but how their dysfunction affects the actual mutations in the genome is not known. Saccharomyces cerevisiae has eight thiol peroxidases of glutathione peroxidase and peroxiredoxin families, and the mutant lacking all these genes (Δ8) is viable. In this study, we employed two independent Δ8 isolates to analyze the genome-wide mutation spectrum that results from deficiency in these enzymes. Deletion of these genes was accompanied by a dramatic increase in point mutations, many of which clustered in close proximity and scattered throughout the genome, suggesting strong mutational bias. We further subjected multiple lines of wild-type and Δ8 cells to long-term mutation accumulation, followed by genome sequencing and phenotypic characterization. Δ8 lines showed a significant increase in nonrecurrent point mutations and indels. The original Δ8 cells exhibited reduced growth rate and decreased life span, which were further reduced in all Δ8 mutation accumulation lines. Although the mutation spectrum of the two independent isolates was different, similar patterns of gene expression were observed, suggesting the direct contribution of thiol peroxidases to the observed phenotypes. Expression of a single thiol peroxidase could partially restore the growth phenotype of Δ8 cells. This study shows how deficiency in nonessential, yet critical and conserved oxidoreductase function, leads to increased mutational load and decreased fitness. en_US
dc.description.sponsorship National Institutes of Health (GM065204) en_US
dc.identifier.citation Kaya, A., Lobanov, A.V., Gerashchenko, M.V., Koren, A., Fomenko, D.E., Koç, A., and Gladyshev, V.N. (2014). Thiol peroxidase deficiency leads to increased mutational load and decreased fitness in saccharomyces cerevisiae. Genetics, 198(3), 905-917. doi:10.1534/genetics.114.169243 en_US
dc.identifier.doi 10.1534/genetics.114.169243 en_US
dc.identifier.doi 10.1534/genetics.114.169243
dc.identifier.issn 0016-6731
dc.identifier.issn 1943-2631
dc.identifier.scopus 2-s2.0-84908641210
dc.identifier.uri https://doi.org/10.1534/genetics.114.169243
dc.identifier.uri https://hdl.handle.net/11147/5754
dc.language.iso en en_US
dc.publisher Genetics Society of America en_US
dc.relation.ispartof Genetics en_US
dc.rights info:eu-repo/semantics/openAccess en_US
dc.subject Fungal DNA en_US
dc.subject Fungal enzyme en_US
dc.subject Genomic DNA en_US
dc.subject Saccharomyces cerevisiae en_US
dc.subject Thiol peroxidase en_US
dc.subject Peroxidases en_US
dc.title Thiol Peroxidase Deficiency Leads To Increased Mutational Load and Decreased Fitness in Saccharomyces Cerevisiae en_US
dc.type Article en_US
dspace.entity.type Publication
gdc.author.institutional Koç, Ahmet
gdc.bip.impulseclass C4
gdc.bip.influenceclass C5
gdc.bip.popularityclass C5
gdc.coar.access open access
gdc.coar.type text::journal::journal article
gdc.collaboration.industrial false
gdc.description.department İzmir Institute of Technology. Molecular Biology and Genetics en_US
gdc.description.endpage 917 en_US
gdc.description.issue 3 en_US
gdc.description.publicationcategory Makale - Uluslararası Hakemli Dergi - Kurum Öğretim Elemanı en_US
gdc.description.scopusquality Q2
gdc.description.startpage 905 en_US
gdc.description.volume 198 en_US
gdc.description.wosquality Q1
gdc.identifier.openalex W1992083533
gdc.identifier.pmid 25173844
gdc.identifier.wos WOS:000344373300009
gdc.index.type WoS
gdc.index.type Scopus
gdc.index.type PubMed
gdc.oaire.accesstype HYBRID
gdc.oaire.diamondjournal false
gdc.oaire.impulse 6.0
gdc.oaire.influence 2.9836391E-9
gdc.oaire.isgreen true
gdc.oaire.keywords Saccharomyces cerevisiae Proteins
gdc.oaire.keywords Genomic DNA
gdc.oaire.keywords Saccharomyces cerevisiae
gdc.oaire.keywords Fungal enzyme
gdc.oaire.keywords Fungal DNA
gdc.oaire.keywords Phenotype
gdc.oaire.keywords INDEL Mutation
gdc.oaire.keywords Mutation Rate
gdc.oaire.keywords Peroxidases
gdc.oaire.keywords Thiol peroxidase
gdc.oaire.keywords Gene Expression Regulation, Fungal
gdc.oaire.keywords Mutation
gdc.oaire.keywords Point Mutation
gdc.oaire.keywords Genetic Fitness
gdc.oaire.keywords Genome, Fungal
gdc.oaire.keywords Transcriptome
gdc.oaire.keywords Gene Deletion
gdc.oaire.keywords DNA Damage
gdc.oaire.popularity 2.3294158E-9
gdc.oaire.publicfunded false
gdc.oaire.sciencefields 0301 basic medicine
gdc.oaire.sciencefields 0303 health sciences
gdc.oaire.sciencefields 03 medical and health sciences
gdc.openalex.collaboration International
gdc.openalex.fwci 0.86076238
gdc.openalex.normalizedpercentile 0.72
gdc.opencitations.count 11
gdc.plumx.crossrefcites 10
gdc.plumx.mendeley 22
gdc.plumx.pubmedcites 8
gdc.plumx.scopuscites 10
gdc.scopus.citedcount 10
gdc.wos.citedcount 9
relation.isAuthorOfPublication.latestForDiscovery d29dea09-1a83-4b6d-808f-e9a8708ab47e
relation.isOrgUnitOfPublication.latestForDiscovery 9af2b05f-28ac-4013-8abe-a4dfe192da5e

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