Development of an Improved Amplex Red Peroxidation Activity Assay for Screening Cytochrome P450 Variants and Identification of a Novel Mutant of the Thermophilic Cyp119

dc.contributor.author Başlar, M. Semih
dc.contributor.author Sakallı, Tuğçe
dc.contributor.author Güralp, Gülce
dc.contributor.author Kestevur Doğru, Ekin
dc.contributor.author Haklı, Emre
dc.contributor.author Sürmeli, Nur Başak
dc.coverage.doi 10.1007/s00775-020-01816-w
dc.date.accessioned 2021-01-24T18:43:09Z
dc.date.available 2021-01-24T18:43:09Z
dc.date.issued 2020
dc.description.abstract Biocatalysts are increasingly utilized in the synthesis of drugs and agrochemicals as an alternative to chemical catalysis. They are preferred in the synthesis of enantiopure products due to their high regioselectivity and enantioselectivity. Cytochrome P450 (P450) oxygenases are valuable biocatalysts, since they catalyze the oxidation of carbon-hydrogen bonds with high efficiency and selectivity. However, practical use of P450s is limited due to their need for expensive cofactors and electron transport partners. P450s can employ hydrogen peroxide (H2O2) as an oxygen and electron donor, but the reaction with H(2)O(2)is inefficient. The development of P450s that can use H(2)O(2)will expand their applications. Here, an assay that utilizes Amplex Red peroxidation, to rapidly screen H2O2-dependent activity of P450 mutants in cell lysate was developed. This assay was employed to identify mutants of CYP119, a thermophilic P450 fromSulfolobus acidocaldarius, with increased peroxidation activity. A mutant library of CYP119 containing substitutions in the heme active site was constructed via combinatorial active-site saturation test and screened for improved activity. Screening of 158 colonies led to five mutants with higher activity. Among improved variants, T213R/T214I was characterized. T213R/T214I exhibited fivefold higherk(cat)for Amplex Red peroxidation and twofold higherk(cat)for styrene epoxidation. T213R/T214I showed higher stability towards heme degradation by H2O2. While theK(m)for H(2)O(2)and styrene were not altered by the mutation, a fourfold decrease in the affinity for another substrate, lauric acid, was observed. In conclusion, Amplex Red peroxidation screening of CYP119 mutants yielded enzymes with increased peroxide-dependent activity. [GRAPHICS] . en_US
dc.description.sponsorship This work was supported by The Scientific and Technological Research Council of Turkey [TUBTAK, 116Z380]. We thank Ali Ouz Buyukkileci for his help with the HPLC analysis and Calar Karakaya for allowing access to ultrasonicator instrument. en_US
dc.identifier.doi 10.1007/s00775-020-01816-w
dc.identifier.issn 0949-8257
dc.identifier.issn 1432-1327
dc.identifier.scopus 2-s2.0-85090978307
dc.identifier.uri https://doi.org/10.1007/s00775-020-01816-w
dc.identifier.uri https://hdl.handle.net/11147/10426
dc.language.iso en en_US
dc.publisher Springer en_US
dc.relation Hidrokarbonların Seçimli Oksidasyonu İçin Isıya Dayanıklı ve Yüksek Verimli Bir Biyokatalizör Elde Edilmesi
dc.relation.ispartof Journal of Biological Inorganic Chemistry en_US
dc.rights info:eu-repo/semantics/openAccess en_US
dc.subject Cytochrome en_US
dc.subject Biocatalysis en_US
dc.subject Protein engineering en_US
dc.subject Enzyme kinetics en_US
dc.subject Heme en_US
dc.title Development of an Improved Amplex Red Peroxidation Activity Assay for Screening Cytochrome P450 Variants and Identification of a Novel Mutant of the Thermophilic Cyp119 en_US
dc.type Article en_US
dspace.entity.type Publication
gdc.author.institutional Başlar, M. Semih
gdc.author.institutional Sakallı, Tuğçe
gdc.author.institutional Güralp, Gülce
gdc.author.institutional Kestevur Doğru, Ekin
gdc.author.institutional Haklı, Emre
gdc.author.institutional Sürmeli, Nur Başak
gdc.bip.impulseclass C4
gdc.bip.influenceclass C5
gdc.bip.popularityclass C4
gdc.coar.access open access
gdc.coar.type text::journal::journal article
gdc.collaboration.industrial false
gdc.description.department İzmir Institute of Technology. Bioengineering en_US
gdc.description.endpage 962 en_US
gdc.description.issue 7 en_US
gdc.description.publicationcategory Makale - Uluslararası Hakemli Dergi - Kurum Öğretim Elemanı en_US
gdc.description.scopusquality Q3
gdc.description.startpage 949 en_US
gdc.description.volume 25 en_US
gdc.description.wosquality Q2
gdc.identifier.openalex W3086312631
gdc.identifier.pmid 32924072
gdc.identifier.wos WOS:000568977300001
gdc.index.type WoS
gdc.index.type Scopus
gdc.index.type PubMed
gdc.oaire.diamondjournal false
gdc.oaire.downloads 4
gdc.oaire.impulse 18.0
gdc.oaire.influence 3.111124E-9
gdc.oaire.isgreen true
gdc.oaire.keywords Cytochrome P-450 Enzyme System
gdc.oaire.keywords Archaeal Proteins
gdc.oaire.keywords Catalytic Domain
gdc.oaire.keywords Mutation
gdc.oaire.keywords Oxazines
gdc.oaire.keywords Heme
gdc.oaire.keywords Hydrogen Peroxide
gdc.oaire.keywords Oxidation-Reduction
gdc.oaire.popularity 8.827615E-9
gdc.oaire.publicfunded false
gdc.oaire.sciencefields 0301 basic medicine
gdc.oaire.sciencefields 0303 health sciences
gdc.oaire.sciencefields 03 medical and health sciences
gdc.oaire.views 2
gdc.openalex.collaboration National
gdc.openalex.fwci 1.01546024
gdc.openalex.normalizedpercentile 0.74
gdc.opencitations.count 19
gdc.plumx.crossrefcites 1
gdc.plumx.mendeley 18
gdc.plumx.pubmedcites 3
gdc.plumx.scopuscites 9
gdc.scopus.citedcount 9
gdc.wos.citedcount 9
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