Isolation of Arcobacter Species From Different Water Sources and Characterization of Isolated Species by Molecular Techniques

dc.contributor.advisor Atabay, Halil İbrahim
dc.contributor.author Akıncıoğlu, Funda
dc.date.accessioned 2014-07-22T13:50:52Z
dc.date.available 2014-07-22T13:50:52Z
dc.date.issued 2011
dc.description Thesis (Master)--Izmir Institute of Technology, Biotechnology, Izmir, 2011 en_US
dc.description Includes bibliographical references (leaves: 51-65) en_US
dc.description Text in English; Abstract: Turkish and English en_US
dc.description xii, 76 leaves en_US
dc.description.abstract Arcobacter is a Gram-negative, spiral-shaped bacterium and belongs to the family Campylobacteraceae. They are known as a potential foodborne and waterborne pathogen. The aim of this study was to determine the prevalence of Arcobacter spp. in different water sources in addition to their phenotypic and genetic characterization. One hundred and fifteen samples collected from various water sources in zmir and surrounding area were used to isolate Arcobacter. The isolated strains were identified at the genus level by PCR showing that 42 samples (37%) were found to contain Arcobacter. Then, a multiplex PCR (m-PCR) was used to differentiate the isolates at the species level, revealing that 21 samples (sewage n=13, river n=7 and drinking water n=1) were positive for A. butzleri. The remaining undifferentiated isolates (n=21) were further analysed by 16S rRNA gene sequencing, displaying that 19 were identified as A. butzleri with a similarity level of between 96-99%. In addition, the antimicrobial susceptibility of the Arcobacter isolates obtained was tested using a disc diffusion method. All the isolates tested (n=39) were found susceptible to tetracycline and ciprofloxacin, but resistant to vancomycin. This is the first study carried out in zmir to determine the prevalence and distribution of Arcobacter spp. from various water sources. The study showed that water sources including drinking water are common reservoirs and potential transmission vehicles for this emerging pathogen, suggesting that appropriate intervention measures should be taken to protect human health. en_US
dc.identifier.uri https://hdl.handle.net/11147/3106
dc.language.iso en en_US
dc.publisher Izmir Institute of Technology en_US
dc.rights info:eu-repo/semantics/openAccess en_US
dc.subject.lcsh Water--Microbiology en
dc.subject.lcsh Campylobacter en
dc.title Isolation of Arcobacter Species From Different Water Sources and Characterization of Isolated Species by Molecular Techniques en_US
dc.type Master Thesis en_US
dspace.entity.type Publication
gdc.author.institutional Akıncıoğlu, Funda
gdc.coar.access open access
gdc.coar.type text::thesis::master thesis
gdc.description.department Thesis (Master)--İzmir Institute of Technology, Bioengineering en_US
gdc.description.publicationcategory Tez en_US
gdc.description.scopusquality N/A
gdc.description.wosquality N/A
relation.isAuthorOfPublication.latestForDiscovery 2f6b6e37-d60e-4ee5-bdae-541c5d26676a
relation.isOrgUnitOfPublication.latestForDiscovery 9af2b05f-28ac-4019-8abe-a4dfe192da5e

Files

Original bundle

Now showing 1 - 1 of 1
Loading...
Name:
T000920.pdf
Size:
9.45 MB
Format:
Adobe Portable Document Format
Description:
MasterThesis

License bundle

Now showing 1 - 1 of 1
Loading...
Name:
license.txt
Size:
1.71 KB
Format:
Item-specific license agreed upon to submission
Description: