Application of 3D Cell Culture Techniques in Nanotoxicology: How Far Are We

dc.contributor.author Shakeri, Raheleh
dc.contributor.author Mirjalili, Seyedeh Zohreh
dc.contributor.author Karakus, Ceyda Oksel
dc.contributor.author Safavi, Maliheh
dc.date.accessioned 2026-02-25T14:59:38Z
dc.date.available 2026-02-25T14:59:38Z
dc.date.issued 2026
dc.description.abstract Investigation of toxicological profile and possible side effects of engineered nanomaterials (ENMs) is of high importance. Historically, two-dimensional (2D) cell culture was used to study the toxicity of the ENMs, but due to their inability to simulate in vivo cell behavior, three-dimensional (3D) cell culture systems have been developed. Nanotoxicity studies initiate with in vitro experiments and continue with in vivo studies, which are very challenging and sometimes accompanied by conflicting data due to the in vitro-in vivo gap. Thus, scientists are turning their attention to microfabrication techniques and engineered systems "called organ-on-a-chips", which act as an intermediate between in vivo and in vitro systems. The present account tries to review the classical study models and suitably cover the emerging 3D culture models including scaffold-free and scaffold-based 3D cell cultures, 3D co-culture with direct contact and without cell-cell contact methods as well as microfluidic-based tissue chips and organoids. Overall, this review aims to give readers a better insight about the ENMs' toxicology and fill the gaps between the knowledge and practical techniques. Hopefully, the presented information will resolve the issues of 2D in vitro cultures and display the clinically relevant responses to the concerns of therapeutic ENMs. en_US
dc.description.sponsorship TWAS-UNESCO [3240319967] en_US
dc.description.sponsorship The authors gratefully acknowledge the partial support from the Iranian Research Organization for Science and Technology (IROST). Authors also acknowledge "Mr. M. Semih Baslar" (from Izmir Institute of Technology) for his efforts on the manuscript improvement. en_US
dc.identifier.doi 10.1007/s12015-025-11052-x
dc.identifier.issn 2629-3269
dc.identifier.issn 2629-3277
dc.identifier.scopus 2-s2.0-105029299075
dc.identifier.uri https://doi.org/10.1007/s12015-025-11052-x
dc.identifier.uri https://hdl.handle.net/11147/18941
dc.language.iso en en_US
dc.publisher Springer en_US
dc.relation.ispartof Stem Cell Reviews and Reports en_US
dc.rights info:eu-repo/semantics/closedAccess en_US
dc.subject Cytotoxicity en_US
dc.subject In Vivo Mimic en_US
dc.subject Nanomedicine en_US
dc.subject Side Effects en_US
dc.subject Therapeutic Nanosystem en_US
dc.title Application of 3D Cell Culture Techniques in Nanotoxicology: How Far Are We en_US
dc.type Article en_US
dspace.entity.type Publication
gdc.author.scopusid 55932020200
gdc.author.scopusid 57218911376
gdc.author.scopusid 58882532000
gdc.author.scopusid 25227167300
gdc.author.wosid Shakeri, Raheleh/Aar-2285-2020
gdc.author.wosid Öksel Karakuş, Ceyda/Aas-5372-2020
gdc.author.wosid Safavi, Maliheh/X-8690-2018
gdc.description.department İzmir Institute of Technology en_US
gdc.description.departmenttemp [Shakeri, Raheleh] Univ Kurdistan, Fac Sci, Dept Biol Sci, Sanandaj, Iran; [Mirjalili, Seyedeh Zohreh] Univ Tehran Med Sci, Endocrinol & Metab Clin Sci Inst, Endocrinol & Metab Res Ctr, Tehran, Iran; [Karakus, Ceyda Oksel] Izmir Inst Technol, Dept Bioengn, Izmir, Turkiye; [Safavi, Maliheh] Iranian Res Org Sci & Technol, Dept Biotechnol, Tehran, Iran en_US
gdc.description.publicationcategory Makale - Uluslararası Hakemli Dergi - Kurum Öğretim Elemanı en_US
gdc.description.scopusquality Q1
gdc.description.woscitationindex Science Citation Index Expanded
gdc.description.wosquality Q2
gdc.identifier.pmid 41634503
gdc.identifier.wos WOS:001678428800001
gdc.index.type WoS
gdc.index.type Scopus
gdc.index.type PubMed
relation.isAuthorOfPublication.latestForDiscovery 9a5440a9-66a1-4a24-ac0b-d63d67043bd6
relation.isOrgUnitOfPublication.latestForDiscovery 9af2b05f-28ac-4015-8abe-a4dfe192da5e

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