Chromatographic Analysis for Targeted Metabolomics of Antioxidant and Flavor-Related Metabolites in Tomato

dc.contributor.author Gürbüz Çolak, Nergiz
dc.contributor.author Tek, Neslihan
dc.contributor.author Frary, Anne
dc.contributor.author Doğanlar, Sami
dc.date.accessioned 2021-11-06T09:48:29Z
dc.date.available 2021-11-06T09:48:29Z
dc.date.issued 2021
dc.description.abstract Targeted metabolomics is a useful approach to evaluate crop breeding studies. Antioxidant and flavor-related traits are of increasing interest and are considered quality traits in tomato breeding. The present study presents chromatographic methods to study antioxidants (carotenoids, vitamin C, vitamin E, phenolic compounds, and glutathione) and flavor -related characters (sugars and organic acids) in tomato. Two different extraction methods (for polar and apolar entities) were applied to isolate the targeted compounds. The extraction methods developed in this work were time and cost-effective since no further purification was needed. Carotenoids, vitamin C, glutathione, and phenolic acids were analyzed by HPLC-PDA using a RP C18 column at an appropriate wavelength for each compound. Vitamin E and sugars were analyzed by HPLC with RP C18 and NH2 columns and detected by FLD and RI detectors, respectively. In addition, organic acids were analyzed with GC-FID using a Rtx 5DA column after derivatization with MSTFA. As a result, sensitive analytical methods to quantify important plant metabolites were developed and are described herein. These methods are not only applicable in tomato but are also useful to characterize other species for flavor-related and antioxidant compounds. Thus, these protocols can be used to guide selection in crop breeding. en_US
dc.description.sponsorship This work was supported by funds from the Scientific and Technological Research Council of Turkey (TUBITAK, project number 114Z116) and the Republic of Turkey Ministry of Agriculture and Forestry, General Directorate of Agricultural Research Institute (TAGEM-16/AR-GE/03). This protocol was derived from Gurbuz colak et al. (2020a and 2020b) manuscripts. en_US
dc.identifier.doi 10.21769/BioProtoc.3929
dc.identifier.issn 2331-8325
dc.identifier.scopus 2-s2.0-85116054245
dc.identifier.uri https://doi.org/10.21769/BioProtoc.3929
dc.identifier.uri https://hdl.handle.net/11147/11401
dc.language.iso en en_US
dc.publisher Bio-Protocol en_US
dc.relation Domates (Solanum lycopersicum L.)'te Birincil ve İkincil Metabolitler ve Anahtar Enzimler için Kantitatif Karakter Lokus Analizleri
dc.relation.ispartof Bio-Protocol en_US
dc.rights info:eu-repo/semantics/openAccess en_US
dc.subject Carotenoids en_US
dc.subject Vitamins en_US
dc.subject Phenolic compounds en_US
dc.subject Glutathione en_US
dc.subject Sugars en_US
dc.subject Organic acids en_US
dc.title Chromatographic Analysis for Targeted Metabolomics of Antioxidant and Flavor-Related Metabolites in Tomato en_US
dc.type Article en_US
dspace.entity.type Publication
gdc.bip.impulseclass C5
gdc.bip.influenceclass C5
gdc.bip.popularityclass C5
gdc.coar.access open access
gdc.coar.type text::journal::journal article
gdc.collaboration.industrial false
gdc.description.department İzmir Institute of Technology. Molecular Biology and Genetics en_US
gdc.description.issue 5 en_US
gdc.description.publicationcategory Makale - Uluslararası Hakemli Dergi - Kurum Öğretim Elemanı en_US
gdc.description.scopusquality Q4
gdc.description.volume 11 en_US
gdc.description.wosquality Q3
gdc.identifier.openalex W3129345449
gdc.identifier.pmid 33796605
gdc.identifier.wos WOS:000627055300001
gdc.index.type WoS
gdc.index.type Scopus
gdc.index.type PubMed
gdc.oaire.accesstype GOLD
gdc.oaire.diamondjournal false
gdc.oaire.impulse 0.0
gdc.oaire.influence 2.635068E-9
gdc.oaire.isgreen true
gdc.oaire.keywords QH301-705.5
gdc.oaire.keywords Biology (General)
gdc.oaire.popularity 1.9373685E-9
gdc.oaire.publicfunded false
gdc.oaire.sciencefields 0301 basic medicine
gdc.oaire.sciencefields 03 medical and health sciences
gdc.oaire.sciencefields 01 natural sciences
gdc.oaire.sciencefields 0104 chemical sciences
gdc.openalex.collaboration National
gdc.openalex.fwci 0.21829525
gdc.openalex.normalizedpercentile 0.36
gdc.opencitations.count 0
gdc.plumx.mendeley 15
gdc.plumx.pubmedcites 2
gdc.plumx.scopuscites 3
gdc.scopus.citedcount 3
gdc.wos.citedcount 3
local.message.claim 2022-06-15T14:14:48.148+0300 *
local.message.claim |rp02683 *
local.message.claim |submit_approve *
local.message.claim |dc_contributor_author *
local.message.claim |None *
relation.isAuthorOfPublication.latestForDiscovery 2b0722e6-21d1-4d3e-88d0-33352713ed2c
relation.isOrgUnitOfPublication.latestForDiscovery 9af2b05f-28ac-4013-8abe-a4dfe192da5e

Files

Original bundle

Now showing 1 - 1 of 1
Loading...
Name:
BioProtoc-11-05-3929.pdf
Size:
1.09 MB
Format:
Adobe Portable Document Format