Chromatographic Analysis for Targeted Metabolomics of Antioxidant and Flavor-Related Metabolites in Tomato
| dc.contributor.author | Gürbüz Çolak, Nergiz | |
| dc.contributor.author | Tek, Neslihan | |
| dc.contributor.author | Frary, Anne | |
| dc.contributor.author | Doğanlar, Sami | |
| dc.date.accessioned | 2021-11-06T09:48:29Z | |
| dc.date.available | 2021-11-06T09:48:29Z | |
| dc.date.issued | 2021 | |
| dc.description.abstract | Targeted metabolomics is a useful approach to evaluate crop breeding studies. Antioxidant and flavor-related traits are of increasing interest and are considered quality traits in tomato breeding. The present study presents chromatographic methods to study antioxidants (carotenoids, vitamin C, vitamin E, phenolic compounds, and glutathione) and flavor -related characters (sugars and organic acids) in tomato. Two different extraction methods (for polar and apolar entities) were applied to isolate the targeted compounds. The extraction methods developed in this work were time and cost-effective since no further purification was needed. Carotenoids, vitamin C, glutathione, and phenolic acids were analyzed by HPLC-PDA using a RP C18 column at an appropriate wavelength for each compound. Vitamin E and sugars were analyzed by HPLC with RP C18 and NH2 columns and detected by FLD and RI detectors, respectively. In addition, organic acids were analyzed with GC-FID using a Rtx 5DA column after derivatization with MSTFA. As a result, sensitive analytical methods to quantify important plant metabolites were developed and are described herein. These methods are not only applicable in tomato but are also useful to characterize other species for flavor-related and antioxidant compounds. Thus, these protocols can be used to guide selection in crop breeding. | en_US |
| dc.description.sponsorship | This work was supported by funds from the Scientific and Technological Research Council of Turkey (TUBITAK, project number 114Z116) and the Republic of Turkey Ministry of Agriculture and Forestry, General Directorate of Agricultural Research Institute (TAGEM-16/AR-GE/03). This protocol was derived from Gurbuz colak et al. (2020a and 2020b) manuscripts. | en_US |
| dc.identifier.doi | 10.21769/BioProtoc.3929 | |
| dc.identifier.issn | 2331-8325 | |
| dc.identifier.scopus | 2-s2.0-85116054245 | |
| dc.identifier.uri | https://doi.org/10.21769/BioProtoc.3929 | |
| dc.identifier.uri | https://hdl.handle.net/11147/11401 | |
| dc.language.iso | en | en_US |
| dc.publisher | Bio-Protocol | en_US |
| dc.relation | Domates (Solanum lycopersicum L.)'te Birincil ve İkincil Metabolitler ve Anahtar Enzimler için Kantitatif Karakter Lokus Analizleri | |
| dc.relation.ispartof | Bio-Protocol | en_US |
| dc.rights | info:eu-repo/semantics/openAccess | en_US |
| dc.subject | Carotenoids | en_US |
| dc.subject | Vitamins | en_US |
| dc.subject | Phenolic compounds | en_US |
| dc.subject | Glutathione | en_US |
| dc.subject | Sugars | en_US |
| dc.subject | Organic acids | en_US |
| dc.title | Chromatographic Analysis for Targeted Metabolomics of Antioxidant and Flavor-Related Metabolites in Tomato | en_US |
| dc.type | Article | en_US |
| dspace.entity.type | Publication | |
| gdc.bip.impulseclass | C5 | |
| gdc.bip.influenceclass | C5 | |
| gdc.bip.popularityclass | C5 | |
| gdc.coar.access | open access | |
| gdc.coar.type | text::journal::journal article | |
| gdc.collaboration.industrial | false | |
| gdc.description.department | İzmir Institute of Technology. Molecular Biology and Genetics | en_US |
| gdc.description.issue | 5 | en_US |
| gdc.description.publicationcategory | Makale - Uluslararası Hakemli Dergi - Kurum Öğretim Elemanı | en_US |
| gdc.description.scopusquality | Q4 | |
| gdc.description.volume | 11 | en_US |
| gdc.description.wosquality | Q3 | |
| gdc.identifier.openalex | W3129345449 | |
| gdc.identifier.pmid | 33796605 | |
| gdc.identifier.wos | WOS:000627055300001 | |
| gdc.index.type | WoS | |
| gdc.index.type | Scopus | |
| gdc.index.type | PubMed | |
| gdc.oaire.accesstype | GOLD | |
| gdc.oaire.diamondjournal | false | |
| gdc.oaire.impulse | 0.0 | |
| gdc.oaire.influence | 2.635068E-9 | |
| gdc.oaire.isgreen | true | |
| gdc.oaire.keywords | QH301-705.5 | |
| gdc.oaire.keywords | Biology (General) | |
| gdc.oaire.popularity | 1.9373685E-9 | |
| gdc.oaire.publicfunded | false | |
| gdc.oaire.sciencefields | 0301 basic medicine | |
| gdc.oaire.sciencefields | 03 medical and health sciences | |
| gdc.oaire.sciencefields | 01 natural sciences | |
| gdc.oaire.sciencefields | 0104 chemical sciences | |
| gdc.openalex.collaboration | National | |
| gdc.openalex.fwci | 0.21829525 | |
| gdc.openalex.normalizedpercentile | 0.36 | |
| gdc.opencitations.count | 0 | |
| gdc.plumx.mendeley | 15 | |
| gdc.plumx.pubmedcites | 2 | |
| gdc.plumx.scopuscites | 3 | |
| gdc.scopus.citedcount | 3 | |
| gdc.wos.citedcount | 3 | |
| local.message.claim | 2022-06-15T14:14:48.148+0300 | * |
| local.message.claim | |rp02683 | * |
| local.message.claim | |submit_approve | * |
| local.message.claim | |dc_contributor_author | * |
| local.message.claim | |None | * |
| relation.isAuthorOfPublication.latestForDiscovery | 2b0722e6-21d1-4d3e-88d0-33352713ed2c | |
| relation.isOrgUnitOfPublication.latestForDiscovery | 9af2b05f-28ac-4013-8abe-a4dfe192da5e |
Files
Original bundle
1 - 1 of 1
Loading...
- Name:
- BioProtoc-11-05-3929.pdf
- Size:
- 1.09 MB
- Format:
- Adobe Portable Document Format
