Scopus İndeksli Yayınlar Koleksiyonu / Scopus Indexed Publications Collection
Permanent URI for this collectionhttps://hdl.handle.net/11147/7148
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Article Citation - WoS: 6Citation - Scopus: 6A Novel Land Surface Temperature Reconstruction Method and Its Application for Downscaling Surface Soil Moisture With Machine Learning(Elsevier, 2024) Güngör, Şahin; Güngör, Şahin; Gündüz, Orhan; Gündüz, Orhan; 03.10. Department of Mechanical Engineering; 03.07. Department of Environmental Engineering; 03. Faculty of Engineering; 01. Izmir Institute of TechnologyDownscaling of soil moisture data is important for high resolution hydrological modeling. Most downscaling studies in the literature have used spatially discontinuous land surface temperature (LST) maps as the main auxiliary parameter, which limits the creation of continuous soil moisture maps. The number of studies on soil moisture downscaling with machine learning that use gapless LST maps is limited. With this motivation, a hybrid reconstruction method has been proposed in this study to practically obtain continuous LST maps, which are then used to produce high resolution surface soil moisture (SSM) datasets. The proposed method is shown to have high mean performance with R2 and RMSE values of 0.94 and 1.84°K, respectively, for the period between 2019 and 2022. The developed reconstructed LST maps were then used to downscale original 9 km spatial resolution soil moisture datasets of SMAP L3 and SMAP L4 with Random Forest (RF) machine learning algorithm. The RF model were run with four different rainfall datasets, and the MSWEP rainfall dataset was found to produce the best results. The use of antecedent rainfall values as input variables in machine learning models has been shown to improve the performance of the models R2 0.76 to 0.93. The accuracy of the downscaled data was later evaluated for Western Anatolia Basins (WAB) in Türkiye with 31 in-situ stations. The downscaled SMAP L4 had good average statistical indicators R (0.815 ± 0.1), RMSE (0.09 ± 0.047 cm3/cm3), and ubRMSE (0.058 ± 0.025 cm3/cm3). Downscaled SMAP L3 was also validated with in-situ observations with satisfactory R (0.79 ± 0.074), RMSE (0.09 ± 0.043 cm3/cm3), and ubRMSE (0.06 ± 0.026 cm3/cm3) statistics. Furthermore, the performance of the downscaled SMAP L3 was also cross validated with SMAP + Sentinel 1 (L2) dataset between 2019 and 2022. The mean statistics of R (0.761 ± 0.11) and Root Mean Squared Difference (RMSD) (0.05 ± 0.014 cm3/cm3) between downscaled SMAP L3 and L2 data revealed that the new reconstruction method of LST used in the RF model for downscaling of soil moisture performed well to obtain high resolution soil moisture datasets. The proposed technique also overcame the difficulties associated with coastal regions where data was masked for quality considerations, by not only enhancing overall spatial resolution but also filling these data gaps and giving a complete SSM coverage. © 2024 Elsevier B.V.Article Citation - WoS: 10Citation - Scopus: 11Intersection of Microrna and Gene Regulatory Networks and Their Implication in Cancer(Bentham Science Publishers B.V., 2014) Yousef, Malik; Allmer, Jens; Allmer, Jens; 04.03. Department of Molecular Biology and Genetics; 04. Faculty of Science; 01. Izmir Institute of TechnologyMicroRNAs (miRNAs) have attracted heightened attention for their role as post-transcriptional regulators of gene expression. It has become clear that miRNAs can both up- and downregulate protein expression. According to current estimates, most human genes are harboring miRNAs and/or are regulated by them. Thus miRNAs form a complex network of expression regulation which tightly interacts with known gene regulatory networks. Similar to some transcription factors, some miRNAs can have hundreds of target transcripts whose expression they modulate. Thus miRNAs can form complex regulatory networks by themselves, but because their expression is often tightly coordinated with gene expression, they form an intertwined regulatory network with many possible interactions among gene and miRNA regulatory pathways. In this review we first consider gene regulatory networks. Then we discuss microRNAs and their implication in cancer and how they may form regulatory networks. Finally, we give our perspective and provide an outlook including the aspect of personalized medicine.Article Citation - WoS: 6Citation - Scopus: 9Reconstruction of Archaeological Sites: Principles Practice and Evaluation(Taylor and Francis Ltd., 2012) Yaka Çetin, Funda; İpekoğlu, Başak; İpekoğlu, Başak; 02.01. Department of Conservation and Restoration of Cultural Heritage; 02. Faculty of Architecture; 01. Izmir Institute of TechnologyThe reconstruction works at archaeological sites need to be approached with caution to prevent disturbing any surviving evidence. This study aims to develop criteria for the evaluation of reconstructions at archaeological sites. The criteria have been developed through review of current international and national conservation charters to help improve reconstruction proposals. These criteria are determined considering the remain scale and the site scale. Accuracy of the reconstruction, avoidance of physical damage, compatibility of materials, distinguishability of the interventions, availability of the interventions for future applications, and reversibility are the criteria concerning the remain scale; limits of the intervention, retainability of the original characteristics of the site, and perception of the reconstruction are the criteria concerning the site scale. These criteria are applied to the reconstruction works realized at the West Stoa of Agora, zmir, Turkey during 1930s, which had to be dismissed and reimplemented in 2000s. The recent reconstruction was applied with compatible materials; the interventions did not damage the original materials and they are distinguishable. This study of the reconstruction presents the latest architectural information, provides a basis for future studies, and is reversible. The reconstructed structure does not falsify the original characteristics, but enables increased perception of the site.Article Citation - WoS: 6Citation - Scopus: 7Reconstruction of Nonstationary Signals Along the Wavelet Ridges(World Scientific Publishing Co. Pte Ltd, 2006) Özkurt, Nalan; Savacı, Ferit Acar; 03.05. Department of Electrical and Electronics Engineering; 03. Faculty of Engineering; 01. Izmir Institute of TechnologyIn this paper, the nonstationary signals have been recovered using the skeleton along the wavelet ridges in the noisy case and the attractors of the cleaned signals are reconstructed in the phase space by time-delay embedding. In order to verify the signal recovery and reconstruction procedure, the similarity measure Hausdorff distance between cleaned, noise-free original attractors have been calculated. The computations show that the procedure reduces the noise level acceptably and the reconstructed attractors are more similar to the original attractors.