Electrical - Electronic Engineering / Elektrik - Elektronik Mühendisliği
Permanent URI for this collectionhttps://hdl.handle.net/11147/11
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Article Citation - WoS: 18Citation - Scopus: 31Applied Mel-Frequency Discrete Wavelet Coefficients and Parallel Model Compensation for Noise-Robust Speech Recognition(Elsevier, 2006) Tüfekçi, Zekeriya; Gowdy, John N.; Gürbüz, Sabri; Patterson, EricInterfering noise severely degrades the performance of a speech recognition system. The Parallel Model Compensation (PMC) technique is one of the most efficient techniques for dealing with such noise. Another approach is to use features local in the frequency domain, such as Mel-Frequency Discrete Wavelet Coefficients (MFDWCs). In this paper, we investigate the use of PMC and MFDWC features to take advantage of both noise compensation and local features (MFDWCs) to decrease the effect of noise on recognition performance. We also introduce a practical weighting technique based on the noise level of each coefficient. We evaluate the performance of several wavelet-schemes using the NOISEX-92 database for various noise types and noise levels. Finally, we compare the performance of these versus Mel-Frequency Cepstral Coefficients (MFCCs), both using PMC. Experimental results show significant performance improvements for MFDWCs versus MFCCs, particularly after compensating the HMMs using the PMC technique. The best feature vector among the six MFDWCs we tried gave 13.72 and 5.29 points performance improvement, on the average, over MFCCs for -6 and 0 dB SNR, respectively. This corresponds to 39.9% and 62.8% error reductions, respectively. Weighting the partial score of each coefficient based on the noise level further improves the performance. The average error rates for the best MFDWCs dropped from 19.57% to 16.71% and from 3.14% to 2.14% for -6 dB and 0 dB noise levels, respectively, using the weighting scheme. These improvements correspond to 14.6% and 31.8% error reductions for -6 dB and 0 dB noise levels, respectively. (c) 2006 Elsevier B.V. All rights reserved.Article Citation - WoS: 67Citation - Scopus: 78Chirp Group Delay Analysis of Speech Signals(Elsevier, 2007) Bozkurt, Barış; Couvreur, Laurent; Dutoit, ThierryThis study proposes new group delay estimation techniques that can be used for analyzing resonance patterns of short-term discrete-time signals and more specifically speech signals. Phase processing or equivalently group delay processing of speech signals are known to be difficult due to large spikes in the phase/group delay functions that mask the formant structure. In this study, we first analyze in detail the z-transform zero patterns of short-term speech signals in the z-plane and discuss the sources of spikes on group delay functions, namely the zeros closely located to the unit circle. We show that windowing largely influences these patterns, therefore short-term phase processing. Through a systematic study, we then show that reliable phase/group delay estimation for speech signals can be achieved by appropriate windowing and group delay functions can reveal formant information as well as some of the characteristics of the glottal flow component in speech signals. However, such phase estimation is highly sensitive to noise and robust extraction of group delay based parameters remains difficult in real acoustic conditions even with appropriate windowing. As an alternative, we propose processing of chirp group delay functions, i.e. group delay functions computed on a circle other than the unit circle in z-plane, which can be guaranteed to be spike-free. We finally present one application in feature extraction for automatic speech recognition (ASR). We show that chirp group delay representations are potentially useful for improving ASR performance. (c) 2007 Elsevier B.V. All rights reserved.Article Citation - WoS: 18Citation - Scopus: 19Generalized Bayesian Model Selection for Speckle on Remote Sensing Images(Institute of Electrical and Electronics Engineers Inc., 2019) Karakuş, Oktay; Kuruoğlu, Ercan E.; Altınkaya, Mustafa AzizSynthetic aperture radar (SAR) and ultrasound (US) are two important active imaging techniques for remote sensing, both of which are subject to speckle noise caused by coherent summation of back-scattered waves and subsequent nonlinear envelope transformations. Estimating the characteristics of this multiplicative noise is crucial to develop denoising methods and to improve statistical inference from remote sensing images. In this paper, reversible jump Markov chain Monte Carlo (RJMCMC) algorithm has been used with a wider interpretation and a recently proposed RJMCMC-based Bayesian approach, trans-space RJMCMC, has been utilized. The proposed method provides an automatic model class selection mechanism for remote sensing images of SAR and US where the model class space consists of popular envelope distribution families. The proposed method estimates the correct distribution family, as well as the shape and the scale parameters, avoiding performing an exhaustive search. For the experimental analysis, different SAR images of urban, forest and agricultural scenes, and two different US images of a human heart have been used. Simulation results show the efficiency of the proposed method in finding statistical models for speckle.Article Citation - WoS: 14Citation - Scopus: 17Evaluation of Synchronization Measures for Capturing the Lagged Synchronization Between Eeg Channels: a Cognitive Task Recognition Approach(Elsevier, 2019) Olcay, Bilal Orkan; Karaçalı, BilgeDuring cognitive, perceptual and sensory tasks, connectivity profile changes across different regions of the brain. Variations of such connectivity patterns between different cognitive tasks can be evaluated using pairwise synchronization measures applied to electrophysiological signals, such as electroencephalography (EEG). However, connectivity-based task recognition approaches achieving viable recognition performance have been lacking from the literature. By using several synchronization measures, we identify time lags between channel pairs during different cognitive tasks. We employed mutual information, cross correntropy, cross correlation, phase locking value, cosine similarity and nonlinear interdependence measures. In the training phase, for each type of cognitive task, we identify the time lags that maximize the average synchronization between channel pairs. These lags are used to calculate pairwise synchronization values with which we construct the train and test feature vectors for recognition of the cognitive task carried out using Fisher's linear discriminant (FLD) analysis. We tested our framework in a motor imagery activity recognition scenario on PhysioNet Motor Movement/Imagery and BCI Competition-III IVa datasets. For PhysioNet dataset, average performance results ranging between % 51 and % 61 across 20 subjects. For BCI Competition-III dataset, we achieve an average recognition performance of % 76 which is above the minimum reliable communication rate (% 70). We achieved an average accuracy over the minimum reliable communication rate on the BCI Competition-III dataset. Performance levels were lower on the PhysioNet dataset. These results indicate that a viable task recognition system is achievable using pairwise synchronization measures evaluated at the proper task specific lags.Article Citation - WoS: 62Citation - Scopus: 70Railway Monitoring System Using Optical Fiber Grating Accelerometers(IOP Publishing Ltd., 2018) Yüksel, Kıvılcım; Kinet, Damien; Moeyaert, Veronique; Kouroussis, Georges; Caucheteur, ChristopheOptimal operation, reduced energy consumption, longer service availability, and high safety level are the major concerns in today's railway transport systems. Smart monitoring systems should address these issues without interrupting railway operability. Many successful works have been carried out to provide railway monitoring functions using fiber Bragg grating (FBG) sensors on rail. Most of them are based on strain measurement due to the train passage. This paper presents a highly sensitive means for railway monitoring based on vibration measurement. FBG accelerometers placed on sleeper have been employed as sensor heads, which significantly facilitated the field sensor installation work compared to the positioning on the foot of the rail. An optimized signal demodulation algorithm has been effectively used to extract from the accelerometer traces both the axle number and the average speed information. Excellent capability of the developed system to obtain both parameters has been demonstrated by the way of field trials carried out on a Belgian railway line, during its normal operation. Easy installation, multi-function diagnosis, good data integrity, and compatibility with fiber optic sensors make the proposed sensor a good candidate for railway monitoring applications.Article Citation - WoS: 59Citation - Scopus: 57Cmos Enabled Microfluidic Systems for Healthcare Based Applications(John Wiley and Sons Inc., 2018) Hussian, Muhammad M.; Khan, Sherjeel M.; Gümüş, Abdurrahman; Nassar, Joanna M.With the increased global population, it is more important than ever to expand accessibility to affordable personalized healthcare. In this context, a seamless integration of microfluidic technology for bioanalysis and drug delivery and complementary metal oxide semiconductor (CMOS) technology enabled data-management circuitry is critical. Therefore, here, the fundamentals, integration aspects, and applications of CMOS-enabled microfluidic systems for affordable personalized healthcare systems are presented. Critical components, like sensors, actuators, and their fabrication and packaging, are discussed and reviewed in detail. With the emergence of the Internet-of-Things and the upcoming Internet-of-Everything for a people–process–data–device connected world, now is the time to take CMOS-enabled microfluidics technology to as many people as possible. There is enormous potential for microfluidic technologies in affordable healthcare for everyone, and CMOS technology will play a major role in making that happen.Article Citation - WoS: 20Citation - Scopus: 22Key Error Rates in Physical Layer Key Generation: Theoretical Analysis and Measurement-Based Verification(Institute of Electrical and Electronics Engineers Inc., 2017) Topal, Ozan Alp; Karabulut Kurt, Güneş; Özbek, BernaChannel gains are frequently used to obtain a secret key that can be used for encryption in physical layer security systems. However, the channel gains captured by the nodes may not always be the same due to channel estimation errors. This would result in a non-zero key error rate (KER). In this letter, we obtain theoretical expressions for KER in orthogonal frequency division multiplexing systems. Tight KER approximations are provided based on Gauss-Laguerre quadrature. A measurementbased study is conducted by using software defined radio nodes to demonstrate the validity and the practicality of the provided results.Article Citation - WoS: 560Citation - Scopus: 607A Community Effort To Assess and Improve Drug Sensitivity Prediction Algorithms(Nature Publishing Group, 2014) Costello, James C.; Heiser, Laura M.; Georgii, Elisabeth; Gönen, Mehmet; Menden, Michael P.; Wang, Nicholas J.; Bansal, Mukesh; Ammad-ud-din, Muhammad; Hintsanen, Petteri; Khan, Suleiman A.; Mpindi, John-Patrick; Kallioniemi, Olli; Honkela, Antti; Aittokallio, Tero; Wennerberg, Krister; NCI-DREAM Community; Karaçalı, Bilge; Collins, James J.; Gallahan, Dan; Singer, Dinah; Saez-Rodriguez, Julio; Kaski, Samuel; Gray, Joe W.; Stolovitzky, GustavoPredicting the best treatment strategy from genomic information is a core goal of precision medicine. Here we focus on predicting drug response based on a cohort of genomic, epigenomic and proteomic profiling data sets measured in human breast cancer cell lines. Through a collaborative effort between the National Cancer Institute (NCI) and the Dialogue on Reverse Engineering Assessment and Methods (DREAM) project, we analyzed a total of 44 drug sensitivity prediction algorithms. The top-performing approaches modeled nonlinear relationships and incorporated biological pathway information. We found that gene expression microarrays consistently provided the best predictive power of the individual profiling data sets; however, performance was increased by including multiple, independent data sets. We discuss the innovations underlying the top-performing methodology, Bayesian multitask MKL, and we provide detailed descriptions of all methods. This study establishes benchmarks for drug sensitivity prediction and identifies approaches that can be leveraged for the development of new methods.Article Citation - WoS: 240Citation - Scopus: 264A Community Computational Challenge To Predict the Activity of Pairs of Compounds(Nature Publishing Group, 2014) Bansal, Mukesh; Yang, Jichen; Karan, Charles; Menden, Michael P.; Costello, James C.; Tang, Hao; Xiao, Guanghua; Li, Yajuan; Allen, Jeffrey; Zhong, Rui; Chen, Beibei; Kim, Minsoo; Wang, Tao; Heiser, Laura M.; Realubit, Ronald; Mattioli, Michela; Alvarez, Mariano J.; Shen, Yao; NCI-DREAM Community; Karaçalı, Bilge; Gallahan, Daniel; Singer, Dinah; Saez-Rodriguez, Julio; Xie, Yang; Stolovitzky, Gustavo; Califano, AndreaRecent therapeutic successes have renewed interest in drug combinations, but experimental screening approaches are costly and often identify only small numbers of synergistic combinations. The DREAM consortium launched an open challenge to foster the development of in silico methods to computationally rank 91 compound pairs, from the most synergistic to the most antagonistic, based on gene-expression profiles of human B cells treated with individual compounds at multiple time points and concentrations. Using scoring metrics based on experimental dose-response curves, we assessed 32 methods (31 community-generated approaches and SynGen), four of which performed significantly better than random guessing. We highlight similarities between the methods. Although the accuracy of predictions was not optimal, we find that computational prediction of compound-pair activity is possible, and that community challenges can be useful to advance the field of in silico compound-synergy prediction.Article Citation - WoS: 8Citation - Scopus: 9Dynamic Shared Spectrum Allocation for Underlaying Device-To Communications(Institute of Electrical and Electronics Engineers Inc., 2017) Özbek, Berna; Pischella, Mylene; Le Ruyet, DidierThis article provides an overview on spectrum sharing in D2D underlaying communications for 5G and beyond 5G applications. Various spectrum sharing algorithms are summarized within a framework of underlaying D2D communications in cellular networks to increase spectrum efficiency. Dynamic spectrum sharing algorithms in the frequency, power, and spatial dimensions are proposed for underlaying D2D communications with both single antenna and multiple antennas at the base station. Performance evaluations show the effectiveness of the proposed algorithms in terms of average data rate per D2D pair.