Electrical - Electronic Engineering / Elektrik - Elektronik Mühendisliği
Permanent URI for this collectionhttps://hdl.handle.net/11147/11
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Article Citation - WoS: 1Citation - Scopus: 1Resting Electroencephalography Differences Between Eyes-Closed and Eyes-Open Conditions in Children With Subclinical Hypothyroidism(AVES, 2023) Bayazıt, Onur; Kahya, Mehmet Cemal; Çatlı, Gönül; Kocaaslan Atlı, Sibel; Olgaç Dündar, Nihal; Erdoğan, Uğraş; Evirgen Esin, NurObjective: Electroencephalography changes that occur during the transition from eyes-closed to the eyes-open state in resting condition are related to the early phase of sensory processing and are defined as activation. The present study aimed to reveal the potential deteriorations that may occur in the initial period of sensory processing in resting electroencephalography between children with subclinical hypothyroidism and a control group. Materials and Methods: Electroencephalographies of 15 children with subclinical hypothy-roidism and 15 healthy children aged 10 to 17 years were recorded for 2 minutes for EC and 2 minutes for eyes-open conditions in resting state. Absolute electroencephalography band powers (μV2) within the delta, theta, alpha, and beta frequency bands were calculated in Fz, Cz, Pz, and Oz electrodes, respectively, for eyes-closed and eyes-open conditions. Results: The results show that, although there was no noteworthy difference between the powers of the electroencephalography frequency bands of children with subclinical hypothyroidism and healthy children during the eyes-open condition, the alpha powers of the control group were significantly higher in all electrodes during the eyes-closed condition. Furthermore, the powers of all frequency bands were observed to decrease in the eyes-open condition in the control group. However, the same net decrease was not observed in the frequency powers of children with subclinical hypothyroidism. Conclusion: According to the results of this study, children with subclinical hypothyroidism may experience information processing impairments starting in the early stages of sensory processing. © 2023, AVES. All rights reserved.Article Citation - WoS: 4Citation - Scopus: 4Mobile human ad hoc networks: A communication engineering viewpoint on interhuman airborne pathogen transmission(Elsevier, 2022) Güleç, Fatih; Atakan, Barış; Dressler, FalkoA number of transmission models for airborne pathogens transmission, as required to understand airborne infectious diseases such as COVID-19, have been proposed independently from each other, at different scales, and by researchers from various disciplines. We propose a communication engineering approach that blends different disciplines such as epidemiology, biology, medicine, and fluid dynamics. The aim is to present a unified framework using communication engineering, and to highlight future research directions for modeling the spread of infectious diseases through airborne transmission. We introduce the concept of mobile human ad hoc networks (MoHANETs), which exploits the similarity of airborne transmission-driven human groups with mobile ad hoc networks and uses molecular communication as the enabling paradigm. In the MoHANET architecture, a layered structure is employed where the infectious human emitting pathogen-laden droplets and the exposed human to these droplets are considered as the transmitter and receiver, respectively. Our proof-of-concept results, which we validated using empirical COVID-19 data, clearly demonstrate the ability of our MoHANET architecture to predict the dynamics of infectious diseases by considering the propagation of pathogen-laden droplets, their reception and mobility of humans.Article Citation - WoS: 101Citation - Scopus: 129Scientific Applications of Distributed Acoustic Sensing: State-Of Review and Perspective(MDPI, 2022) Gorshkov, Boris G.; Yüksel, Kıvılcım; Fotiadi, Andrei A.; Wuilpart, Marc; Korobko, Dmitry A.; Zhirnov, Andrey A.; Lobach, Ivan A.This work presents a detailed review of the development of distributed acoustic sensors (DAS) and their newest scientific applications. It covers most areas of human activities, such as the engineering, material, and humanitarian sciences, geophysics, culture, biology, and applied mechanics. It also provides the theoretical basis for most well-known DAS techniques and unveils the features that characterize each particular group of applications. After providing a summary of research achievements, the paper develops an initial perspective of the future work and determines the most promising DAS technologies that should be improved.Article Citation - WoS: 24Citation - Scopus: 26Fiber Bragg Grating Regeneration at 450°c for Improved High Temperature Sensing(The Optical Society, 2019) Chah, Karima; Yüksel, Kıvılcım; Kinet, Damien; Yazd, Nazila Safari; Megret, Patrice; Caucheteur, ChristopheType-I fiber Bragg gratings photo-inscribed in hydrogen-loaded B/Ge co-doped silica single-mode optical fibers have been regenerated efficiently at 450 degrees C, which is the lowest temperature reported so far. The mechanical strength of the annealed fiber is preserved while ensuring temperature sensing of the regenerated gratings up to 900 degrees C. Unlike low temperature cycles (<= 600 degrees C), an annealing process at higher temperatures revealed faster regeneration for strong gratings. Changes in grating strength were also measured before the regeneration cycle. These behaviors suggest the contribution of different mechanisms to the regeneration process with different relative dynamics. (C) 2019 Optical Society of America.Article Citation - WoS: 19Citation - Scopus: 21Spectral Shadowing Suppression Technique in Phase-Otdr Sensing Based on Weak Fiber Bragg Grating Array(The Optical Society, 2019) de Miguel Soto, Veronica; Jason, Johan; Kurtoğlu, Deniz; Lopez-Amo, Manuel; Wuilpart, MarcA postprocessing procedure is presented to suppress spectral shadowing in phase-OTDR sensing systems based on a weak fiber Bragg grating array. A complete theoretical analysis of the interfering signals has been carried out to identify a compensation method. The proposed approach has been applied to simulated and experimental phase-OTDR in the context of vibration measurements. Fast Fourier transform has been employed to analyze the obtained results, which has verified the validity of the proposed method to suppress spectral shadowing. (C) 2019 Optical Society of AmericaArticle Citation - WoS: 26Citation - Scopus: 27Implementation of a Mobile Platform Based on Fiber Bragg Grating Sensors for Automotive Traffic Monitoring(MDPI, 2020) Yüksel, Kıvılcım; Kinet, Damien; Chah, Karima; Caucheteur, ChristopheInstrumentation techniques, implementation and installation methods are major concerns in today's distributed and quasi-distributed monitoring applications using fiber optic sensors. Although many successful traffic monitoring experiments have been reported using Fiber Bragg Gratings (FBGs), there has been no standardized solution proposed so far to have FBG seamlessly implemented in roads. In this work, we investigate a mobile platform including FBG sensors that can be positioned on roads for the purpose of vehicle speed measurements. The experimental results prove the efficiency of the proposed platform, providing a perspective toward weigh-in-motion systems.Article Citation - WoS: 7Citation - Scopus: 7Demonstration of Pulse Controlled All-Optical Switch/Modulator(The Optical Society, 2014) Akın, Osman; Dinleyici, Mehmet SalihAn all-optical pulse controlled switch/modulator based on evanescent coupling between a polymer slab waveguide and a single mode fiber is demonstrated. Very fast all-optical modulation/switching is achieved via Kerr effect of the nonlinear polymer placed in the evanescent region of the optical fiber. Local refractive index perturbation (δn = -1.45612 × 10 -5) on the thin film leads to 0.374 nW power modulation at the fiber output, which results in a switching efficiency of ≈1.5%.Article Citation - Scopus: 13The Prognostic Value of Tumor-Stroma Proportion in Laryngeal Squamous Cell Carcinoma(Federation of Turkish Pathology Societies, 2013) Ünlü, Mehtat; Çetinayak, Hasan Oğuz; Önder, Devrim; Ecevit, Cenk; Akman, Fadime; İkiz, Ahmet ömer; Ada, Emel; Karaçalı, Bilge; Sarıoğlu, SülenObjective: Tumor-stroma proportion of tumor has been presented as a prognostic factor in some types of adenocarcinomas, but there is no information about squamous cell carcinomas and laryngeal carcinomas. Material and Method: Five digital images of the tumor sections were obtained from 85 laryngeal carcinomas. Proportion of epithelial tumor component and stroma were measured by a software tool, allowing the pathologists to mark 205.6 μm2 blocks on areas as carcinomatous/stromal, by clicking at the image. Totally, 3.451 mm2 tumor areas have been marked to 16.785 small square blocks for each case. Results: Median follow up was 48 months (range 3-194). The mean tumor-stroma proportion was 48.63+18.18. There was no difference for tumor-stroma proportion when tumor location, grade, stage and perinodal invasion were considered. Although the following results were statistically insignificant, the mean tumor-stroma proportion was the lowest (37.46±12.49) for subglottic carcinomas, and it was 52.41±37.47, 50.86+19.84 and 44.56±16.91 for supraglottic, transglottic and glottic cases. The tumor-stroma proportion was lowest in cases with perinodal invasion and the highest in cases without lymph node metastasis (44.72±20.23, 47.77±17.37, 50.05±17.34). Tumor-stroma proportion was higher in the basaloid subtype compared with the classical squamous cell carcinoma (53.76±14.70 and 48.63±18.38 respectively). The overall and disease-free survival analysis did not reveal significance for tumor-stroma proportion (p=0.08, p=0.38). Only pathological stage was an independent factor for overall survival (p=0.008). Conclusion: This is the first series investigating tumor-stroma proportion as a prognostic marker in laryngeal carcinomas proposing a new method, but the findings do not support tumor-stroma proportion as a prognostic marker.Article Citation - WoS: 7Citation - Scopus: 9Automatic Identification of Highly Conserved Family Regions and Relationships in Genome Wide Datasets Including Remote Protein Sequences(Public Library of Science, 2013) Doğan, Tunca; Karaçalı, BilgeIdentifying shared sequence segments along amino acid sequences generally requires a collection of closely related proteins, most often curated manually from the sequence datasets to suit the purpose at hand. Currently developed statistical methods are strained, however, when the collection contains remote sequences with poor alignment to the rest, or sequences containing multiple domains. In this paper, we propose a completely unsupervised and automated method to identify the shared sequence segments observed in a diverse collection of protein sequences including those present in a smaller fraction of the sequences in the collection, using a combination of sequence alignment, residue conservation scoring and graph-theoretical approaches. Since shared sequence fragments often imply conserved functional or structural attributes, the method produces a table of associations between the sequences and the identified conserved regions that can reveal previously unknown protein families as well as new members to existing ones. We evaluated the biological relevance of the method by clustering the proteins in gold standard datasets and assessing the clustering performance in comparison with previous methods from the literature. We have then applied the proposed method to a genome wide dataset of 17793 human proteins and generated a global association map to each of the 4753 identified conserved regions. Investigations on the major conserved regions revealed that they corresponded strongly to annotated structural domains. This suggests that the method can be useful in predicting novel domains on protein sequences.