Chemistry / Kimya
Permanent URI for this collectionhttps://hdl.handle.net/11147/4072
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Conference Object Optimization of Mass Spectrometric Ionisation Efficiency Data(Springer Verlag, 1997) Özgen, İsmet Tamerkan; Altungöz, Oya; Salih, B.; Vandeginste, B. G. M.A new method is developed and tested to find out the excited electronic and vibrational energy levels (fine structure) of molecules from mass spectrometric ionisation efficiency data which were obtained by a conventional mass spectrometer ion source having normal electron energy distribution. Electrons emitted in a conventional mass spectrometer ion source are not monoenergetic, therefore, evaluation of Ionisation Potentials (IF) and Appearance Potentials (AP) from experimental data creates some problems. This is even worse in the evaluation of Fine Structure (excited electronic and vibrational energy levels) from ionisation efficiency data [1]. This is overcome either by using specially designed monoenergetic ion sources which have their own problems (manufacture of special design, difficulty of operation, too much decrease of ion current), or by eliminating disturbing effects in the ionisation efficiency data by some deconvolution techniques [2,4,5,6,7,9]. In this study attempts were made to eliminate the deteriorating effects (mainly arising from electron energy distribution and noise) in the ionisation efficiency data by a deconvolution technique. The technique was applied to the ionisation efficiency data of molecular nitrogen,oxygen and methylammine and its fragment and interesting results were obtained.Conference Object Labeling of Gly-Gly With Technetium-99m and the Assessment of It's Radiopharmaceutical Potential(Springer Verlag, 2001) Taner, M.S.; Özdemir, Durmuş; Köseoğlu, K.; Argon, M.; Dirlik, A.; Duman, Y.[No abstract available]Article Citation - WoS: 21Citation - Scopus: 24Modification of Electrospun Pva/Paa Scaffolds by Cold Atmospheric Plasma: Alignment, Antibacterial Activity, and Biocompatibility(Springer Verlag, 2019) Arik, Nehir; İnan, Alper; İbiş, Fatma; Demirci, Emine A.; Karaman, Ozan; Ercan, Utku K.; Horzum, NesrinThe ongoing search for better antibacterial wound care dressings has led to the design and fabrication of advanced functional nanomaterials. Taking advantage of electrospinning and cold atmospheric plasma (CAP), free-standing nanofibrous scaffolds are promising for use in novel biomedical applications. Random and aligned polyvinyl alcohol (PVA)/polyacrylic acid (PAA) nanofiber scaffolds are fabricated by electrospinning and treated with CAP. In this study, we investigate the effects of CAP treatment on alignment, hydrophilicity, antibacterial activity, and biocompatibility in determining the surface properties of the nanofibrous scaffolds. The results of vibrational polarization spectroscopy analysis indicate that CAP treatment changes the degree of alignment of the nanofibers. Furthermore, both random and aligned CAP-treated nanofibrous scaffolds show significant antibacterial activity against the E. coli strain. The results of an in vitro scratch assay reveal that CAP treatment of PVA/PAA nanofibers has no toxic effect.Article Citation - WoS: 6Citation - Scopus: 6Esterification of 1-Octanol on Clinoptilolite-Supported Tio2 Catalysts(Springer Verlag, 2019) Özyağcı, Bensu; Şahin, Volkan; Karabakan, AbdulkerimIn this study, a natural type of zeolite, Clinoptilolite (CLI), is used as a support for TiO2. First, TiO2-supported heterogeneous catalysts originated from the high temperature calcination of TiCl4 groups, which were thermally immobilized on clinoptilolite, were obtained. Powder-XRD and EDX analyzes showed that the oxide form of Ti-immobilized on dealuminated clinoptilolite were formed in the anatase phase, and the zeolite structure was preserved. As seen in TGA/DTA analyzes, this catalyst could be efficient and have high stability for many reactions. Second, the esterification reaction of 1-octanol with acetic acid is used as a reference reaction for this catalyst.Book Part Citation - Scopus: 8The Multiwavelength Uv/Vis Detector: New Possibilities With an Added Spectral Dimension(Springer Verlag, 2016) Karabudak, Engin; Cölfen, HelmutThe multiwavelength (MWL) detector is a new type of absorption detector for AUC. The commercial absorption detector of the Beckman Coulter XLA AUC can only handle a single wavelength per scan with the possibility to scan at maximum 3 wavelengths, whereas MWL-AUC can handle all the wavelengths in the UV/Vis region at one time. The result is impressive since now a full spectral dimension is added to each single scan. In this chapter, we are explaining development history, instrumentation, and future perspective of MWL-AUC.Article Citation - WoS: 5Citation - Scopus: 5Tannery Wastewater Sediments Produced by Clinoptiolite/Polyacrylamide-aided Flocculation as a Clay Additive in Brick Making(Springer Verlag, 2017) Köseoğlu, Kemal; Cengizler, H.; İsrail, L. İ.; Polat, HürriyetToxic tannery wastewater(s) (TWW) pose(s) a great risk to the environment. This study explores the potential of mitigating the harmful effects of TWW through sedimentation using clinoptiolite in the presence of various anionic, cationic and non-ionic flocculants with different molecular weights and charge densities followed by encapsulation in a brick structure for stability. Compressive strength (CS), size reduction after firing (SRAF), water absorption (WA) and colouring parameters of bricks were determined. X-Ray diffraction (XRD) and scanning electron microscopy (SEM)-energy dispersive X-ray (EDX) analyses were conducted on brick bodies. Kinetic leaching experiments were conducted for possible heavy metal release from the bricks. Bricks containing 10 wt% leather waste and 5 wt% clinoptiolite sintered at 800 °C instead of 920 °C possessed similar properties to the standard brick (SB).Article Citation - WoS: 21Citation - Scopus: 23Determination of Caco 3 and Sio 2 Content in the Binders of Historic Lime Mortars(Springer Verlag, 2012) Uğurlu Sağın, Elif; Böke, Hasan; Aras, Nadir; Yalçın, ŞerifeThe binders of historic mortars composed of small grain sized silica (SiO 2) and carbonated lime (CaCO 3) are considered as the main part that give hydraulic character and high strength to the mortar. In this study, FTIR, SEM-EDS, LIBS and XRD spectroscopy were used to find out the weight ratios of CaCO 3 to SiO 2 in the binders of historic lime mortars. For this purpose, a series of pure calcium carbonate and silica mixture were prepared in ten combinations in varying ratios from 0.5 to 5. Calibration curve was prepared for each analysis by plotting the peak area or intensity ratios of CaCO 3 to SiO 2 versus the weight ratios of CaCO 3 to SiO 2. A good linear correlation coefficient was obtained for each analysis respectively. The analyses were then tested on the binder of the Roman mortar samples. The results indicated that FTIR, SEM-EDS and LIBS spectroscopy are convenient tools to determine the weight ratios of CaCO 3 to SiO 2 in the binders of mortars. But XRD spectroscopy is not convenient for quantitative analysis of binders due to the presence of varied amounts of amorphous or poor crystalline silica in their compositions.Article Citation - WoS: 23Citation - Scopus: 25Molecular Cloning, Over Expression and Characterization of Thermoalkalophilic Esterases Isolated From Geobacillus Sp(Springer Verlag, 2011) Tekedar, Hasan Cihad; Şanlı Mohamed, GülşahDue to potential use for variety of biotechnological applications, genes encoding thermoalkalophilic esterase from three different Geobacillus strains isolated from thermal environmental samples in Balçova (Agamemnon) geothermal site were cloned and respective proteins were expressed in Escherichia coli (E. coli) and characterized in detail. Three esterases (Est1, Est2, Est3) were cloned directly by PCR amplification using consensus degenerate primers from genomic DNA of the strains Est1, Est2 and Est3 which were from mud, reinjection water and uncontrolled thermal leak, respectively. The genes contained an open reading frame (ORF) consisting of 741 bp for Est1 and Est2, which encoded 246 amino acids and ORF of Est3 was 729 bp encoded 242 amino acids. The esterase genes were expressed in E. coli and purified using His-Select HF nickel affinity gel. The molecular mass of the recombinant enzyme for each esterase was approximately 27. 5 kDa. The three esterases showed high specific activity toward short chain p-NP esters. Recombinant Est1, Est2, Est3 have exhibited similar activity and the highest esterase activity of 1,100 U/mg with p-nitrophenyl acetate (pNPC2) as substrate was observed with Est1. All three esterase were most active around 65°C and pH 9.5-10.0. The effect of organic solvents, several metal ions, inhibitors and detergents on enzyme activity for purified Est1, Est2, Est3 were determined separately and compared.Article Citation - WoS: 24Citation - Scopus: 32Determination of Lignin and Extractive Content of Turkish Pine ( Pinus Brutia Ten.) Trees Using Near Infrared Spectroscopy and Multivariate Calibration(Springer Verlag, 2011) Üner, Birol; Karaman, İbrahim; Tanrıverdi, H.; Özdemir, DurmuşDetermination of quality parameters such as lignin and extractive content of wood samples by wet chemistry analyses takes a long time. Near-infrared (NIR) spectroscopy coupled with multivariate calibration offers a fast and nondestructive alternative to obtain reliable results. However, due to the complexity of the NIR spectra, some wavelength selection is generally required to improve the predictive ability of multivariate calibration methods. Pinus brutia Ten. is the most growing pine species in Turkey. Its rotation period is around 80 years; the forest products industry has widely accepted the use of Pinus brutia Ten. because of its ability to grow on a wide range of sites and its suitability to produce desirable products. Pinus brutia Ten. is widely used in construction, window door panel, floor covering, etc. Determination of lignin and extractive content of wood provides information to tree breeders on when to cut and how much chemicals are needed for the pulping and bleaching process. In this study, 58 samples of Pinus brutia Ten. trees were collected in Isparta region of Turkey, and their lignin and extractive content were determined with standard reference (TAPPI) methods. Then, the same samples were scanned with near-infrared spectrometer between 1,000 and 2,500 nm in diffuse reflectance mode, and multivariate calibration models were built with genetic inverse least squares method for both lignin and extractive content using the concentration information obtained from wet standard reference method. Overall, standard error of calibration (SEC) and standard error of prediction (SEP) ranged between 0.35% (w/w) and 2.40% (w/w).Article Citation - WoS: 12Citation - Scopus: 16Carotenoid Profile in Prochlorococcus Sp. and Enrichment of Lutein Using Different Nitrogen Sources(Springer Verlag, 2016) Erdoğan, Ayşegül; Demirel, Zeliha; Eroğlu, Ahmet Emin; Conk Dalay, MeltemVarious carotenoids of the cyanobacterium Prochlorococcus sp. are identified using chromatographic/spectroscopic techniques and quantified using HPLC-DAD. In the present study, β-apo-8′-carotenal was used as internal standard. Identification of carotenoids was carried out by comparing the retention time, absorption spectra, and mass spectra of unknown peaks with reference standards. All-trans-lutein was found to be the major carotenoid in this cyanobacterium, and, therefore, algal productivity and the potential for lutein accumulation were analyzed as a function of different nitrogen sources such as nitrate, nitrite, ammonia, and urea for cultivation. Among them, urea clearly led to the best lutein accumulation. According to the experimental evidence, lutein increased from 2.54 to 3.34 mg g−1 in the cyanobacteria when urea was used as the nitrogen source. © 2016, Springer Science+Business Media Dordrecht.