Proteomic Changes During Boron Tolerance in Barley (hordeum Vulgare) and the Role of Vacuolar Proton-Translocating Atpase Subunit E

dc.contributor.author Atik, Ahmet Emin
dc.contributor.author Bozdağ, Gönensin Ozan
dc.contributor.author Akıncı, Ersin
dc.contributor.author Kaya, Alaattin
dc.contributor.author Koç, Ahmet
dc.contributor.author Yalçın, Talat
dc.contributor.author Karakaya, Hüseyin Çağlar
dc.coverage.doi 10.3906/bot-1007-29
dc.date.accessioned 2017-03-15T12:13:54Z
dc.date.available 2017-03-15T12:13:54Z
dc.date.issued 2011
dc.description.abstract Boron is an essential micronutrient for plants and animals; however, it can be toxic when present at high concentrations. The purpose of this study was to understand the mechanisms of boron tolerance in the Turkish barley (Hordeum vulgare) Anadolu cultivar. For this purpose, 2-dimensional electrophoresis (2-DE) was used to screen differentially expressed proteins for both control and boron-stressed Anadolu barley genotypes. Seven proteins were revealed by 2-DE: 1) ribulose 1,5-bisphosphate carboxylase/oxygenase (RuBisCo large chain), 2) TLP5, a thaumatin-like protein, 3) PR5, a basic pathogenesis-related protein, 4) a RNase S-like protein, 5) a PSI type III chlorophyll a/b-binding protein, 6) a light-harvesting complex I LHC I, and 7) the vacuolar proton-translocating ATPase subunit E protein. These were found to be upregulated in response to boron treatment. Even though the protein encoded by the V-ATPase subunit E gene was overexpressed, its transcript level was downregulated by boron treatment. Heterologous expression of the barley V-ATPase subunit E gene in yeast provided boron resistance to yeast cells. These results indicated that the V-ATPase subunit E gene was functional and conferred tolerance to toxic boron levels in yeast and might play a role in the overall boron tolerance of barley. © TÜBITAK. en_US
dc.description.abstract Bor, bitkiler ve hayvanlar için gerekli olan mikrolementlerdendir. Ancak yüksek konsantrasyonlarda toksik etki göstermektedir. Bu çalışmada bora dayanıklı Anadolu arpa (Hordeum vulgare) genotipindeki bor tolerans mekanizmasının anlaşılması amaçlanmıştır. Kontrol ve bor stresi uygulanmış ve Anadolu genotipi arasındaki farklı seviyede ekspres olan proteinleri taramak için 2 boyutlu elektroforez tekniği uygulanmıştır. İki boyutlu elektroforez deneyi sonucu ekspresyon seviyesi artan yedi protein bulunmuştur: ribuloz 1,5-bifosfat karboksilaz/oksijenaz büyük zincir, thaumatin benzeri protein TLP5, patojenaz benzeri protein PR5, RNaz S benzeri protein, PSI tipi III a/bbağlayıcı protein, ışık toplayan kompleks protein I LHC I ve vakuol proton translokasyon ATPaz alt birim E. V-ATPaz alt birim E geni tarafından kodlanan proteinin seviyesinin bor uygulaması ile artmasına rağmen, genin transkript seviyesi azalmıştır. Arpa V-ATPaz alt birim E geninin maya hücrelerinde ifadenlenmesi maya hücrelerine bora karşı dayanıklılık sağlamıştır. Bu sonuçlar, V-ATPaz alt birim E geninin mayada fonksiyonel olduğunu ve maya hücrelerine, toksik bor seviyelerine karşı dayanıklılık sağladığını ve de arpada bor toleransında bir rolü olabileceğini göstermektedir. en_US
dc.description.sponsorship TUBITAK 104T213; TUBITAK TBAG-2354; IYTE-BAP20 en_US
dc.identifier.citation Atik, A.E., Bozdaǧ, G.O., Akıncı, E., Kaya, A., Koç, A., Yalçın, T., and Karakaya, H. Ç. (2011). Proteomic changes during boron tolerance in barley (Hordeum vulgare) and the role of vacuolar proton-translocating ATPase subunit E. Turkish Journal of Botany, 35(4), 379-388. doi:10.3906/bot-1007-29 en_US
dc.identifier.doi 10.3906/bot-1007-29
dc.identifier.doi 10.3906/bot-1007-29 en_US
dc.identifier.issn 1300-008X
dc.identifier.issn 1303-6106
dc.identifier.issn 1300-008X
dc.identifier.scopus 2-s2.0-79957968766
dc.identifier.uri https://doi.org/10.3906/bot-1007-29
dc.identifier.uri https://hdl.handle.net/11147/5064
dc.identifier.uri https://search.trdizin.gov.tr/yayin/detay/116396
dc.language.iso en en_US
dc.publisher Türkiye Klinikleri Journal of Medical Sciences en_US
dc.relation.ispartof Doga, Turkish Journal of Botany en_US
dc.rights info:eu-repo/semantics/openAccess en_US
dc.subject Boron stress en_US
dc.subject Hordeum vulgare en_US
dc.subject Proteomics en_US
dc.subject Saccharomyces cerevisiae en_US
dc.subject V-ATPase en_US
dc.title Proteomic Changes During Boron Tolerance in Barley (hordeum Vulgare) and the Role of Vacuolar Proton-Translocating Atpase Subunit E en_US
dc.title.alternative Boron Toleransı Sırasında Arpada (hordeum Vulgare) Görülen Proteomik Değişimler ve Vakuol Proton Translokasyon Atpaz Alt Birim E’nin Rolü en_US
dc.type Article en_US
dspace.entity.type Publication
gdc.author.institutional Atik, Ahmet Emin
gdc.author.institutional Bozdağ, Gönensin Ozan
gdc.author.institutional Akıncı, Ersin
gdc.author.institutional Kaya, Alaattin
gdc.author.institutional Koç, Ahmet
gdc.author.institutional Yalçın, Talat
gdc.author.institutional Karakaya, Hüseyin Çağlar
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gdc.bip.impulseclass C5
gdc.bip.influenceclass C5
gdc.bip.popularityclass C5
gdc.coar.access open access
gdc.coar.type text::journal::journal article
gdc.collaboration.industrial false
gdc.description.department İzmir Institute of Technology. Molecular Biology and Genetics en_US
gdc.description.endpage 388 en_US
gdc.description.issue 4 en_US
gdc.description.publicationcategory Makale - Ulusal Hakemli Dergi - Kurum Öğretim Elemanı en_US
gdc.description.scopusquality Q2
gdc.description.startpage 379 en_US
gdc.description.volume 35 en_US
gdc.description.wosquality Q3
gdc.identifier.openalex W234685679
gdc.identifier.trdizinid 116396
gdc.identifier.wos WOS:000292901400008
gdc.index.type WoS
gdc.index.type Scopus
gdc.index.type TR-Dizin
gdc.oaire.diamondjournal false
gdc.oaire.impulse 1.0
gdc.oaire.influence 2.93864E-9
gdc.oaire.isgreen true
gdc.oaire.keywords Proteomics
gdc.oaire.keywords V-ATPase
gdc.oaire.keywords Saccharomyces cerevisiae
gdc.oaire.keywords Boron stress
gdc.oaire.keywords Hordeum vulgare
gdc.oaire.popularity 2.0444035E-9
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gdc.openalex.collaboration National
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gdc.opencitations.count 3
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gdc.scopus.citedcount 14
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local.message.claim 2022-06-06T11:56:50.142+0300 *
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local.message.claim |submit_approve *
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