Molecular Cloning, Over Expression and Characterization of Thermoalkalophilic Esterases Isolated From Geobacillus Sp

dc.contributor.author Tekedar, Hasan Cihad
dc.contributor.author Şanlı Mohamed, Gülşah
dc.coverage.doi 10.1007/s00792-010-0344-1
dc.date.accessioned 2017-03-20T11:20:01Z
dc.date.available 2017-03-20T11:20:01Z
dc.date.issued 2011
dc.description.abstract Due to potential use for variety of biotechnological applications, genes encoding thermoalkalophilic esterase from three different Geobacillus strains isolated from thermal environmental samples in Balçova (Agamemnon) geothermal site were cloned and respective proteins were expressed in Escherichia coli (E. coli) and characterized in detail. Three esterases (Est1, Est2, Est3) were cloned directly by PCR amplification using consensus degenerate primers from genomic DNA of the strains Est1, Est2 and Est3 which were from mud, reinjection water and uncontrolled thermal leak, respectively. The genes contained an open reading frame (ORF) consisting of 741 bp for Est1 and Est2, which encoded 246 amino acids and ORF of Est3 was 729 bp encoded 242 amino acids. The esterase genes were expressed in E. coli and purified using His-Select HF nickel affinity gel. The molecular mass of the recombinant enzyme for each esterase was approximately 27. 5 kDa. The three esterases showed high specific activity toward short chain p-NP esters. Recombinant Est1, Est2, Est3 have exhibited similar activity and the highest esterase activity of 1,100 U/mg with p-nitrophenyl acetate (pNPC2) as substrate was observed with Est1. All three esterase were most active around 65°C and pH 9.5-10.0. The effect of organic solvents, several metal ions, inhibitors and detergents on enzyme activity for purified Est1, Est2, Est3 were determined separately and compared. en_US
dc.description.sponsorship TUBITAK and Izmir Institute of Technology en_US
dc.identifier.citation Tekedar, H.C., and Şanlı Mohamed, G. (2011). Molecular cloning, over expression and characterization of thermoalkalophilic esterases isolated from Geobacillus sp. Extremophiles, 15(2), 203-211. doi:10.1007/s00792-010-0344-1 en_US
dc.identifier.doi 10.1007/s00792-010-0344-1 en_US
dc.identifier.doi 10.1007/s00792-010-0344-1
dc.identifier.issn 1431-0651
dc.identifier.issn 1431-0651
dc.identifier.issn 1433-4909
dc.identifier.scopus 2-s2.0-79952250238
dc.identifier.uri https://doi.org/10.1007/s00792-010-0344-1
dc.identifier.uri https://hdl.handle.net/11147/5099
dc.language.iso en en_US
dc.publisher Springer Verlag en_US
dc.relation.ispartof Extremophiles en_US
dc.rights info:eu-repo/semantics/openAccess en_US
dc.subject Alkalophiles en_US
dc.subject Esterase en_US
dc.subject Geobacillus sp. en_US
dc.subject Overexpression en_US
dc.subject Thermophiles en_US
dc.title Molecular Cloning, Over Expression and Characterization of Thermoalkalophilic Esterases Isolated From Geobacillus Sp en_US
dc.type Article en_US
dspace.entity.type Publication
gdc.author.institutional Tekedar, Hasan Cihad
gdc.author.institutional Şanlı Mohamed, Gülşah
gdc.author.yokid 115002
gdc.bip.impulseclass C4
gdc.bip.influenceclass C4
gdc.bip.popularityclass C4
gdc.coar.access open access
gdc.coar.type text::journal::journal article
gdc.collaboration.industrial false
gdc.description.department İzmir Institute of Technology. Chemistry en_US
gdc.description.endpage 211 en_US
gdc.description.issue 2 en_US
gdc.description.publicationcategory Makale - Uluslararası Hakemli Dergi - Kurum Öğretim Elemanı en_US
gdc.description.scopusquality Q3
gdc.description.startpage 203 en_US
gdc.description.volume 15 en_US
gdc.description.wosquality Q3
gdc.identifier.openalex W2025040331
gdc.identifier.pmid 21181486
gdc.identifier.wos WOS:000290037500007
gdc.index.type WoS
gdc.index.type Scopus
gdc.index.type PubMed
gdc.oaire.accesstype BRONZE
gdc.oaire.diamondjournal false
gdc.oaire.downloads 8
gdc.oaire.impulse 7.0
gdc.oaire.influence 3.560086E-9
gdc.oaire.isgreen true
gdc.oaire.keywords Thermophiles
gdc.oaire.keywords Base Sequence
gdc.oaire.keywords Overexpression
gdc.oaire.keywords Molecular Sequence Data
gdc.oaire.keywords Esterases
gdc.oaire.keywords Temperature
gdc.oaire.keywords Geobacillus
gdc.oaire.keywords Esters
gdc.oaire.keywords Hydrogen-Ion Concentration
gdc.oaire.keywords Esterase
gdc.oaire.keywords Polymerase Chain Reaction
gdc.oaire.keywords Gene Expression Regulation, Enzymologic
gdc.oaire.keywords Substrate Specificity
gdc.oaire.keywords Open Reading Frames
gdc.oaire.keywords Alkalophiles
gdc.oaire.keywords Geobacillus sp.
gdc.oaire.keywords Nickel
gdc.oaire.keywords Sequence Homology, Nucleic Acid
gdc.oaire.keywords Cloning, Molecular
gdc.oaire.popularity 9.518636E-9
gdc.oaire.publicfunded false
gdc.oaire.sciencefields 0301 basic medicine
gdc.oaire.sciencefields 0303 health sciences
gdc.oaire.sciencefields 03 medical and health sciences
gdc.oaire.views 8
gdc.openalex.collaboration National
gdc.openalex.fwci 1.29978528
gdc.openalex.normalizedpercentile 0.77
gdc.opencitations.count 23
gdc.plumx.crossrefcites 14
gdc.plumx.mendeley 21
gdc.plumx.pubmedcites 5
gdc.plumx.scopuscites 25
gdc.scopus.citedcount 25
gdc.wos.citedcount 23
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