Mrna Decay Analysis in Drosophila Melanogaster: Drug-Induced Changes in Glutathione S-Transferase D21 Mrna Stability

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Date

2008

Authors

Akgül, Bünyamin

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Publisher

Academic Press Inc.

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Green Open Access

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Abstract

We have established an in vivo system to investigate mechanisms by which pentobarbital (PB), a psychoactive drug with a sedative effect, changes the rate of decay of gstD21 mRNA (encoding a Drosophila glutathione S-transferase). Here we describe methods for the use of hsp70 promoter-based transgenes and transgenic lines to determine mRNA half-lives by RNase protection assays in Drosophila. We are able to identify and map putative decay intermediates by cRT-PCR and DNA sequencing of the resulting clones. Our results indicate that the 3′-UTR of gstD21 mRNA is responsive to PB by regulating mRNA decay and that the cis-acting element(s) responsible for the PB-mediated stabilization resides in a 59 nucleotide sequence in the 3′-UTR of the gstD21 mRNA (Akgül and Tu, 2007).

Description

Keywords

Drosophila melanogaster, Glutathione transferase, Messenger RNA, RNA stability, Drug effect, RNA Stability, Gene Expression Regulation, Enzymologic, Animals, Genetically Modified, Drosophila melanogaster, Ribonucleases, Pharmaceutical Preparations, Animals, RNA, Messenger, Heat-Shock Response, Glutathione Transferase

Fields of Science

0301 basic medicine, 0303 health sciences, 03 medical and health sciences

Citation

Akgül, B., and Tu, C.-P. D. (2008). mRNA decay analysis in Drosophila melanogaster: Drug-induced changes in glutathione S-transferase D21 mRNA stability. Methods in Enzymology, 448, 285-297. doi:10.1016/S0076-6879(08)02615-3

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Source

Methods in Enzymology

Volume

448

Issue

Start Page

285

End Page

297
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453

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