Mrna Decay Analysis in Drosophila Melanogaster: Drug-Induced Changes in Glutathione S-Transferase D21 Mrna Stability

dc.contributor.author Akgül, Bünyamin
dc.contributor.author Tu, Chen-Pei D.
dc.coverage.doi 10.1016/S0076-6879(08)02615-3
dc.date.accessioned 2017-11-30T13:53:43Z
dc.date.available 2017-11-30T13:53:43Z
dc.date.issued 2008
dc.description.abstract We have established an in vivo system to investigate mechanisms by which pentobarbital (PB), a psychoactive drug with a sedative effect, changes the rate of decay of gstD21 mRNA (encoding a Drosophila glutathione S-transferase). Here we describe methods for the use of hsp70 promoter-based transgenes and transgenic lines to determine mRNA half-lives by RNase protection assays in Drosophila. We are able to identify and map putative decay intermediates by cRT-PCR and DNA sequencing of the resulting clones. Our results indicate that the 3′-UTR of gstD21 mRNA is responsive to PB by regulating mRNA decay and that the cis-acting element(s) responsible for the PB-mediated stabilization resides in a 59 nucleotide sequence in the 3′-UTR of the gstD21 mRNA (Akgül and Tu, 2007). en_US
dc.description.sponsorship National Institute of Environmental Health Sciences (NIEHS) (ES02678) en_US
dc.identifier.citation Akgül, B., and Tu, C.-P. D. (2008). mRNA decay analysis in Drosophila melanogaster: Drug-induced changes in glutathione S-transferase D21 mRNA stability. Methods in Enzymology, 448, 285-297. doi:10.1016/S0076-6879(08)02615-3 en_US
dc.identifier.doi 10.1016/S0076-6879(08)02615-3
dc.identifier.doi 10.1016/S0076-6879(08)02615-3 en_US
dc.identifier.issn 0076-6879
dc.identifier.issn 1557-7988
dc.identifier.scopus 2-s2.0-57749181136
dc.identifier.uri http://doi.org/10.1016/S0076-6879(08)02615-3
dc.identifier.uri https://hdl.handle.net/11147/6523
dc.language.iso en en_US
dc.publisher Academic Press Inc. en_US
dc.relation.ispartof Methods in Enzymology en_US
dc.rights info:eu-repo/semantics/openAccess en_US
dc.subject Drosophila melanogaster en_US
dc.subject Glutathione transferase en_US
dc.subject Messenger RNA en_US
dc.subject RNA stability en_US
dc.subject Drug effect en_US
dc.title Mrna Decay Analysis in Drosophila Melanogaster: Drug-Induced Changes in Glutathione S-Transferase D21 Mrna Stability en_US
dc.type Article en_US
dspace.entity.type Publication
gdc.author.id 0000-0001-9877-9689
gdc.author.id 0000-0001-9877-9689 en_US
gdc.author.institutional Akgül, Bünyamin
gdc.bip.impulseclass C5
gdc.bip.influenceclass C5
gdc.bip.popularityclass C5
gdc.coar.access open access
gdc.coar.type text::journal::journal article
gdc.collaboration.industrial false
gdc.description.department İzmir Institute of Technology. Molecular Biology and Genetics en_US
gdc.description.endpage 297 en_US
gdc.description.publicationcategory Diğer en_US
gdc.description.scopusquality Q4
gdc.description.startpage 285 en_US
gdc.description.volume 448 en_US
gdc.identifier.openalex W23116516
gdc.identifier.pmid 19111182
gdc.identifier.wos WOS:000262252300015
gdc.index.type WoS
gdc.index.type Scopus
gdc.index.type PubMed
gdc.oaire.diamondjournal false
gdc.oaire.impulse 0.0
gdc.oaire.influence 2.635068E-9
gdc.oaire.isgreen false
gdc.oaire.keywords RNA Stability
gdc.oaire.keywords Gene Expression Regulation, Enzymologic
gdc.oaire.keywords Animals, Genetically Modified
gdc.oaire.keywords Drosophila melanogaster
gdc.oaire.keywords Ribonucleases
gdc.oaire.keywords Pharmaceutical Preparations
gdc.oaire.keywords Animals
gdc.oaire.keywords RNA, Messenger
gdc.oaire.keywords Heat-Shock Response
gdc.oaire.keywords Glutathione Transferase
gdc.oaire.popularity 4.2659942E-10
gdc.oaire.publicfunded false
gdc.oaire.sciencefields 0301 basic medicine
gdc.oaire.sciencefields 0303 health sciences
gdc.oaire.sciencefields 03 medical and health sciences
gdc.openalex.collaboration International
gdc.openalex.fwci 0.0
gdc.openalex.normalizedpercentile 0.01
gdc.opencitations.count 0
gdc.plumx.mendeley 8
gdc.plumx.scopuscites 0
gdc.scopus.citedcount 0
gdc.wos.citedcount 0
relation.isAuthorOfPublication.latestForDiscovery e4940f81-a137-4558-a403-cd13fc517ab4
relation.isOrgUnitOfPublication.latestForDiscovery 9af2b05f-28ac-4013-8abe-a4dfe192da5e

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