A Novel Approach Utilizing Rapid Thin-Film Microextraction Method for Salivary Metabolomics Studies in Lung Cancer Diagnosis

dc.contributor.author Pelit, Fusun
dc.contributor.author Erbas, Ilknur
dc.contributor.author Ozupek, Nazli Mert
dc.contributor.author Gul, Merve
dc.contributor.author Sakrak, Esra
dc.contributor.author Ocakoglu, Kasim
dc.contributor.author Goksel, Ozlem
dc.contributor.author Özdemir, Durmuş
dc.date.accessioned 2024-11-25T19:06:31Z
dc.date.available 2024-11-25T19:06:31Z
dc.date.issued 2024
dc.description 0000-0003-0551-664X en_US
dc.description.abstract This study investigated the potential of targeted salivary metabolomics as a convenient diagnostic tool for lung cancer (LC), utilizing a rapid TFME-based method. It specifically examines TFME blades modified with SiO2 nanoparticles, which were produced using a custom-made coating system. Validation of the metabolite biomarker analysis was performed by these blades using liquid chromatography-tandem mass spectroscopy (LCMS/MS). The extraction efficiencies of SiO2 nanoparticle/polyacrylonitrile (PAN) composite-coated blades were compared for 18 metabolites. Response surface methodology (RSM) was used to optimize the analysis conditions. Linear calibration plots were obtained for all metabolites at concentrations between 0.025 to 4.0 mu g/mL in the presence of internal standard, with correlation coefficients (R-2) ranging from 0.9975 to 0.9841. The limit of detection (LOD) and limit of quantitation (LOQ) were in the range of 0.014 to 0.97 mu g mL(-1) and 0.046 to 3.20 mu gmL(-1), respectively. The %RSD values for all analytes were within the acceptable range (less than 20 %) for the proposed method. The method was applied to the saliva samples of 40 patients with LC and 38 healthy controls. The efficacy of metabolites for LC diagnosis was determined by in silico methods and the results reveal that phenylalanine and purine metabolism metabolites (e.g., hypoxanthine) are of great importance for LC diagnosis. Furthermore, potentially significant biomarker analysis results from the ROC curve data reveal that proline, hypoxanthine, and phenylalanine were identified as potential biomarkers for LC diagnosis. en_US
dc.description.sponsorship Scientific and Technological Research Council of Turkiye (TUBITAK) [315S307]; Presidency of Strategy and Budget of the Presidency of Republic of Turkiye [2019 K12-149080] en_US
dc.description.sponsorship <B>Funding</B> was provided by Scientific and Technological Research Council of Turkiye (TUBITAK) under grant number 315S307 and the Presidency of Strategy and Budget of the Presidency of Republic of Turkiye (2019 K12-149080) . en_US
dc.identifier.doi 10.1016/j.microc.2024.112069
dc.identifier.issn 0026-265X
dc.identifier.issn 1095-9149
dc.identifier.scopus 2-s2.0-85207899081
dc.identifier.uri https://doi.org/10.1016/j.microc.2024.112069
dc.identifier.uri https://hdl.handle.net/11147/15053
dc.language.iso en en_US
dc.publisher Elsevier en_US
dc.relation.ispartof Microchemical Journal
dc.rights info:eu-repo/semantics/closedAccess en_US
dc.subject Biomarker en_US
dc.subject Metabolomics en_US
dc.subject Thin Film Microextraction en_US
dc.subject Liquid Chromatography-Tandem Mass Spectrometry en_US
dc.subject Saliva en_US
dc.title A Novel Approach Utilizing Rapid Thin-Film Microextraction Method for Salivary Metabolomics Studies in Lung Cancer Diagnosis en_US
dc.type Article en_US
dspace.entity.type Publication
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gdc.author.institutional Özdemir, Durmuş
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gdc.description.department İzmir Institute of Technology. Chemistry en_US
gdc.description.departmenttemp [Pelit, Fusun; Erbas, Ilknur; Gul, Merve; Pelit, Levent] Ege Univ, Fac Sci, Dept Chem, TR-35100 Bornova, Izmir, Turkiye; [Pelit, Fusun; Erbas, Ilknur; Pelit, Levent; Goksel, Tuncay; Goksel, Ozlem] Ege Univ Translat Pulm Res Ctr EgeSAM, TR-35100 Bornova, Izmir, Turkiye; [Ozupek, Nazli Mert; Basbinar, Yasemin] Dokuz Eylul Univ, Inst Oncol, Dept Translat Oncol, TR-35340 Balcova, Izmir, Turkiye; [Sakrak, Esra] Ege Univ Drug Dev & Pharmacokinet Res & Applicat C, TR-35100 Bornova, Izmir, Turkiye; [Ocakoglu, Kasim] Tarsus Univ, Fac Engn, Dept Engn Fundamental Sci, TR-33400 Tarsus, Mersin, Turkiye; [Ozdemir, Durmus] Izmir Inst Technol, Dept Chem, TR-35430 Urla, Izmir, Turkiye; [Goksel, Tuncay; Goksel, Ozlem] Ege Univ, Fac Med, Dept Pulm Med, Div Immunol & Allergy, TR-35100 Bornova, Izmir, Turkiye en_US
gdc.description.publicationcategory Makale - Uluslararası Hakemli Dergi - Kurum Öğretim Elemanı en_US
gdc.description.scopusquality Q2
gdc.description.volume 207 en_US
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