Identification and Characterization of Novel Thermostable Alpha-Amylase From Geobacillus Sp. Gs33
| dc.contributor.author | Burhanoğlu, Tülin | |
| dc.contributor.author | Sürmeli, Yusuf | |
| dc.contributor.author | Şanlı Mohamed, Gülşah | |
| dc.coverage.doi | 10.1016/j.ijbiomac.2020.07.171 | |
| dc.date.accessioned | 2021-01-24T18:34:20Z | |
| dc.date.available | 2021-01-24T18:34:20Z | |
| dc.date.issued | 2020 | |
| dc.description.abstract | In this study, the heterologous expression and biochemical characterization of a thermostable alpha-amylase from Geobacillus sp. GS33 was investigated. The recombinant alpha-amylase was overexpressed in Escherichia coli BL21 (lambda DE) and purified via anion exchange and size-exclusion chromatography. The purified alpha-amylase had a molecular weight of about 60 kDa, and was active in a broad range of pH 3-10 and temperature (40-90 degrees C) withmaximumactivity at pH 7-8 and 60 degrees C. The enzyme retained 50% residual activity at 65 degrees C, but only 20% at 85 degrees C after 16 h. At pH 9 and pH 7, the residual activity at 65 degrees C was 50% and 30%, respectively. The enzymewas remarkably activated by Co2+, Ca2+, Mg2+, PMSF, DTT, and Triton X-100, but partially inhibited by Cu2+, methanol, hexane, ethanol, acetone, SDS, and Tween 20. A molecular phylogeny analysis showed that the enzyme's amino acid sequence had the closest connection with an alpha-amylase from Geobacillus thermoleovorans subsp. stromboliensis nov. 3D-structure-based amino acid sequence alignments revealed that the three catalytic residues (D217, E246, D314) and the four Ca2+ ion coordination residues (N143, E177, D186, H221) were conserved in alpha-amylase from Geobacillus sp. GS33. The temperature stability and neutral pH optimum suggest that the enzyme may be useful for industrial applications. (C) 2020 Elsevier B.V. All rights reserved. | en_US |
| dc.identifier.doi | 10.1016/j.ijbiomac.2020.07.171 | |
| dc.identifier.issn | 0141-8130 | |
| dc.identifier.issn | 1879-0003 | |
| dc.identifier.scopus | 2-s2.0-85088394880 | |
| dc.identifier.uri | https://doi.org/10.1016/j.ijbiomac.2020.07.171 | |
| dc.identifier.uri | https://hdl.handle.net/11147/10376 | |
| dc.language.iso | en | en_US |
| dc.publisher | Elsevier | en_US |
| dc.relation.ispartof | International Journal of Biological Macromolecules | en_US |
| dc.rights | info:eu-repo/semantics/openAccess | en_US |
| dc.subject | Alpha-Amylase | en_US |
| dc.subject | Geobacillus sp. | en_US |
| dc.subject | Thermostability | en_US |
| dc.title | Identification and Characterization of Novel Thermostable Alpha-Amylase From Geobacillus Sp. Gs33 | en_US |
| dc.type | Article | en_US |
| dspace.entity.type | Publication | |
| gdc.author.institutional | Burhanoğlu, Tülin | |
| gdc.author.institutional | Sürmeli, Yusuf | |
| gdc.author.institutional | Şanlı Mohamed, Gülşah | |
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| gdc.coar.type | text::journal::journal article | |
| gdc.collaboration.industrial | false | |
| gdc.description.department | İzmir Institute of Technology. Bioengineering | en_US |
| gdc.description.department | İzmir Institute of Technology. Chemistry | en_US |
| gdc.description.endpage | 585 | en_US |
| gdc.description.publicationcategory | Makale - Uluslararası Hakemli Dergi - Kurum Öğretim Elemanı | en_US |
| gdc.description.scopusquality | Q1 | |
| gdc.description.startpage | 578 | en_US |
| gdc.description.volume | 164 | en_US |
| gdc.description.wosquality | Q1 | |
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| gdc.identifier.pmid | 32693140 | |
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| gdc.oaire.keywords | anion exchange chromatography | |
| gdc.oaire.keywords | molecular cloning | |
| gdc.oaire.keywords | Models, Molecular | |
| gdc.oaire.keywords | magnesium ion | |
| gdc.oaire.keywords | Hot Temperature | |
| gdc.oaire.keywords | Protein Conformation | |
| gdc.oaire.keywords | acetone | |
| gdc.oaire.keywords | phylogeny | |
| gdc.oaire.keywords | benzylsulfonyl fluoride | |
| gdc.oaire.keywords | bacterial protein | |
| gdc.oaire.keywords | Enzyme Stability | |
| gdc.oaire.keywords | calcium ion | |
| gdc.oaire.keywords | genetics | |
| gdc.oaire.keywords | triton x 100 | |
| gdc.oaire.keywords | Cloning, Molecular | |
| gdc.oaire.keywords | enzyme inhibition | |
| gdc.oaire.keywords | Phylogeny | |
| gdc.oaire.keywords | alcohol | |
| gdc.oaire.keywords | pH | |
| gdc.oaire.keywords | size exclusion chromatography | |
| gdc.oaire.keywords | ion exchange chromatography | |
| gdc.oaire.keywords | Hydrogen-Ion Concentration | |
| gdc.oaire.keywords | Chromatography, Ion Exchange | |
| gdc.oaire.keywords | cobalt | |
| gdc.oaire.keywords | enzyme activity | |
| gdc.oaire.keywords | enzyme structure | |
| gdc.oaire.keywords | hexane | |
| gdc.oaire.keywords | copper ion | |
| gdc.oaire.keywords | sequence alignment | |
| gdc.oaire.keywords | Chromatography, Gel | |
| gdc.oaire.keywords | enzyme active site | |
| gdc.oaire.keywords | Thermodynamics | |
| gdc.oaire.keywords | amylase | |
| gdc.oaire.keywords | enzymology | |
| gdc.oaire.keywords | Geobacillus thermoleovorans | |
| gdc.oaire.keywords | chemistry | |
| gdc.oaire.keywords | ?-Amylase | |
| gdc.oaire.keywords | Article | |
| gdc.oaire.keywords | Evolution, Molecular | |
| gdc.oaire.keywords | thermodynamics | |
| gdc.oaire.keywords | Bacterial Proteins | |
| gdc.oaire.keywords | protein conformation | |
| gdc.oaire.keywords | controlled study | |
| gdc.oaire.keywords | procedures | |
| gdc.oaire.keywords | Amino Acid Sequence | |
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| gdc.oaire.keywords | temperature | |
| gdc.oaire.keywords | Geobacillus | |
| gdc.oaire.keywords | molecular weight | |
| gdc.oaire.keywords | nucleotide sequence | |
| gdc.oaire.keywords | enzyme activation | |
| gdc.oaire.keywords | thermostability | |
| gdc.oaire.keywords | amino acid sequence | |
| gdc.oaire.keywords | dodecyl sulfate sodium | |
| gdc.oaire.keywords | Molecular Weight | |
| gdc.oaire.keywords | polysorbate 20 | |
| gdc.oaire.keywords | Thermostability | |
| gdc.oaire.keywords | heat | |
| gdc.oaire.keywords | molecular model | |
| gdc.oaire.keywords | alpha-Amylases | |
| gdc.oaire.keywords | metabolism | |
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