Identification and Characterization of Novel Thermostable Alpha-Amylase From Geobacillus Sp. Gs33

dc.contributor.author Burhanoğlu, Tülin
dc.contributor.author Sürmeli, Yusuf
dc.contributor.author Şanlı Mohamed, Gülşah
dc.coverage.doi 10.1016/j.ijbiomac.2020.07.171
dc.date.accessioned 2021-01-24T18:34:20Z
dc.date.available 2021-01-24T18:34:20Z
dc.date.issued 2020
dc.description.abstract In this study, the heterologous expression and biochemical characterization of a thermostable alpha-amylase from Geobacillus sp. GS33 was investigated. The recombinant alpha-amylase was overexpressed in Escherichia coli BL21 (lambda DE) and purified via anion exchange and size-exclusion chromatography. The purified alpha-amylase had a molecular weight of about 60 kDa, and was active in a broad range of pH 3-10 and temperature (40-90 degrees C) withmaximumactivity at pH 7-8 and 60 degrees C. The enzyme retained 50% residual activity at 65 degrees C, but only 20% at 85 degrees C after 16 h. At pH 9 and pH 7, the residual activity at 65 degrees C was 50% and 30%, respectively. The enzymewas remarkably activated by Co2+, Ca2+, Mg2+, PMSF, DTT, and Triton X-100, but partially inhibited by Cu2+, methanol, hexane, ethanol, acetone, SDS, and Tween 20. A molecular phylogeny analysis showed that the enzyme's amino acid sequence had the closest connection with an alpha-amylase from Geobacillus thermoleovorans subsp. stromboliensis nov. 3D-structure-based amino acid sequence alignments revealed that the three catalytic residues (D217, E246, D314) and the four Ca2+ ion coordination residues (N143, E177, D186, H221) were conserved in alpha-amylase from Geobacillus sp. GS33. The temperature stability and neutral pH optimum suggest that the enzyme may be useful for industrial applications. (C) 2020 Elsevier B.V. All rights reserved. en_US
dc.identifier.doi 10.1016/j.ijbiomac.2020.07.171
dc.identifier.issn 0141-8130
dc.identifier.issn 1879-0003
dc.identifier.scopus 2-s2.0-85088394880
dc.identifier.uri https://doi.org/10.1016/j.ijbiomac.2020.07.171
dc.identifier.uri https://hdl.handle.net/11147/10376
dc.language.iso en en_US
dc.publisher Elsevier en_US
dc.relation.ispartof International Journal of Biological Macromolecules en_US
dc.rights info:eu-repo/semantics/openAccess en_US
dc.subject Alpha-Amylase en_US
dc.subject Geobacillus sp. en_US
dc.subject Thermostability en_US
dc.title Identification and Characterization of Novel Thermostable Alpha-Amylase From Geobacillus Sp. Gs33 en_US
dc.type Article en_US
dspace.entity.type Publication
gdc.author.institutional Burhanoğlu, Tülin
gdc.author.institutional Sürmeli, Yusuf
gdc.author.institutional Şanlı Mohamed, Gülşah
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gdc.bip.popularityclass C4
gdc.coar.access open access
gdc.coar.type text::journal::journal article
gdc.collaboration.industrial false
gdc.description.department İzmir Institute of Technology. Bioengineering en_US
gdc.description.department İzmir Institute of Technology. Chemistry en_US
gdc.description.endpage 585 en_US
gdc.description.publicationcategory Makale - Uluslararası Hakemli Dergi - Kurum Öğretim Elemanı en_US
gdc.description.scopusquality Q1
gdc.description.startpage 578 en_US
gdc.description.volume 164 en_US
gdc.description.wosquality Q1
gdc.identifier.openalex W3043830944
gdc.identifier.pmid 32693140
gdc.identifier.wos WOS:000588093700054
gdc.index.type WoS
gdc.index.type Scopus
gdc.index.type PubMed
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gdc.oaire.keywords anion exchange chromatography
gdc.oaire.keywords molecular cloning
gdc.oaire.keywords Models, Molecular
gdc.oaire.keywords magnesium ion
gdc.oaire.keywords Hot Temperature
gdc.oaire.keywords Protein Conformation
gdc.oaire.keywords acetone
gdc.oaire.keywords phylogeny
gdc.oaire.keywords benzylsulfonyl fluoride
gdc.oaire.keywords bacterial protein
gdc.oaire.keywords Enzyme Stability
gdc.oaire.keywords calcium ion
gdc.oaire.keywords genetics
gdc.oaire.keywords triton x 100
gdc.oaire.keywords Cloning, Molecular
gdc.oaire.keywords enzyme inhibition
gdc.oaire.keywords Phylogeny
gdc.oaire.keywords alcohol
gdc.oaire.keywords pH
gdc.oaire.keywords size exclusion chromatography
gdc.oaire.keywords ion exchange chromatography
gdc.oaire.keywords Hydrogen-Ion Concentration
gdc.oaire.keywords Chromatography, Ion Exchange
gdc.oaire.keywords cobalt
gdc.oaire.keywords enzyme activity
gdc.oaire.keywords enzyme structure
gdc.oaire.keywords hexane
gdc.oaire.keywords copper ion
gdc.oaire.keywords sequence alignment
gdc.oaire.keywords Chromatography, Gel
gdc.oaire.keywords enzyme active site
gdc.oaire.keywords Thermodynamics
gdc.oaire.keywords amylase
gdc.oaire.keywords enzymology
gdc.oaire.keywords Geobacillus thermoleovorans
gdc.oaire.keywords chemistry
gdc.oaire.keywords ?-Amylase
gdc.oaire.keywords Article
gdc.oaire.keywords Evolution, Molecular
gdc.oaire.keywords thermodynamics
gdc.oaire.keywords Bacterial Proteins
gdc.oaire.keywords protein conformation
gdc.oaire.keywords controlled study
gdc.oaire.keywords procedures
gdc.oaire.keywords Amino Acid Sequence
gdc.oaire.keywords enzyme stability
gdc.oaire.keywords molecular phylogeny
gdc.oaire.keywords methanol
gdc.oaire.keywords nonhuman
gdc.oaire.keywords molecular evolution
gdc.oaire.keywords dithiothreitol
gdc.oaire.keywords temperature
gdc.oaire.keywords Geobacillus
gdc.oaire.keywords molecular weight
gdc.oaire.keywords nucleotide sequence
gdc.oaire.keywords enzyme activation
gdc.oaire.keywords thermostability
gdc.oaire.keywords amino acid sequence
gdc.oaire.keywords dodecyl sulfate sodium
gdc.oaire.keywords Molecular Weight
gdc.oaire.keywords polysorbate 20
gdc.oaire.keywords Thermostability
gdc.oaire.keywords heat
gdc.oaire.keywords molecular model
gdc.oaire.keywords alpha-Amylases
gdc.oaire.keywords metabolism
gdc.oaire.popularity 3.085816E-8
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gdc.oaire.sciencefields 0301 basic medicine
gdc.oaire.sciencefields 0303 health sciences
gdc.oaire.sciencefields 03 medical and health sciences
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gdc.opencitations.count 33
gdc.plumx.crossrefcites 37
gdc.plumx.mendeley 54
gdc.plumx.pubmedcites 6
gdc.plumx.scopuscites 44
gdc.scopus.citedcount 44
gdc.wos.citedcount 39
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