The Soft Nanodots as Fluorescent Probes for Cell Imaging: Analysis of Cell and Spheroid Penetration Behavior of Single Chain Polymer Dots

dc.contributor.author Yücel, Müge
dc.contributor.author Onbaş, Rabia
dc.contributor.author Arslan Yıldız, Ahu
dc.contributor.author Yıldız, Ümit Hakan
dc.date.accessioned 2024-01-30T09:24:43Z
dc.date.available 2024-01-30T09:24:43Z
dc.date.issued 2024
dc.description.abstract This study describes the formation, size control, and penetration behavior of polymer nanodots (Pdots) consisting of single or few chain polythiophene-based conjugated polyelectrolytes (CPEs) via nanophase separation between good solvent and poor solvent of CPE. Though the chain singularity may be associated with dilution nanophase separation suggests that molecules of a good solvent create a thermodynamically driven solvation layer surrounding the CPEs and thereby separating the single chains even in their poor solvents. This statement is therefore corroborated with emission intensity/lifetime, particle size, and scattering intensity of polyelectrolyte in good and poor solvents. Regarding the augmented features, Pdots are implemented into cell imaging studies to understand the nuclear penetration and to differentiate the invasive characteristics of breast cancer cells. The python based red, green, blue (RGB) color analysis depicts that Pdots have more nuclear penetration ability in triple negative breast cancer cells due to the different nuclear morphology in shape and composition and Pdots have penetrated cell membrane as well as extracellular matrix in spheroid models. The current Pdot protocol and its utilization in cancer cell imaging are holding great promise for gene/drug delivery to target cancer cells by explicitly achieving the very first priority of nuclear intake. The penetration capability of cationic soft nanodots in to tumor models of breast cancer is demonstrated. The image analysis based on fluorescence intensity variation reveals the characteristics of translocation of nanodots in dense mediums such as tumor models.image en_US
dc.description.sponsorship This work was supported by the Scientific and Technological Research Council of Turkey TUBITAK Project Nos: 116Z547 and 120Z588 and & Idot;YTE BAP Project No: 2021IYTE-1-0065. M.Y. acknowledged TUBITAK 2214-A International Doctoral Research Fellowship Programme for Ph.D. and R.O. acknowledged TUBITAK 2211-A National Graduate Scholarship Program. The authors acknowledged Prof. Franziska Groehn/Prof. Dirk Guldi for SLS-TCSPC utilization and Prof. Yasemin Basp & imath;nar/Dr. Tolga Sever for their help in confocal microscopy analysis. en_US
dc.identifier.doi 10.1002/mabi.202300402
dc.identifier.issn 1616-5187
dc.identifier.issn 1616-5195
dc.identifier.scopus 2-s2.0-85181916757
dc.identifier.uri https://doi.org/10.1002/mabi.202300402
dc.identifier.uri https://hdl.handle.net/11147/14255
dc.language.iso en en_US
dc.publisher Wiley en_US
dc.relation Konformasyon Değişikliğine Hassas Politiyofen Türevi Polielektrolit Sentezi ve Mikroakışkan DNA Metilasyon Tarama Platformu Geliştirilmesi tr
dc.relation.ispartof Macromolecular Bioscience en_US
dc.rights info:eu-repo/semantics/closedAccess en_US
dc.subject Conjugated polyelectrolyte en_US
dc.subject Image analysis en_US
dc.subject Nanophase separation en_US
dc.subject Polymer dots en_US
dc.subject Breast cancer en_US
dc.title The Soft Nanodots as Fluorescent Probes for Cell Imaging: Analysis of Cell and Spheroid Penetration Behavior of Single Chain Polymer Dots en_US
dc.type Article en_US
dc.type Article en_US
dspace.entity.type Publication
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gdc.author.id 0000-0001-7032-392X en_US
gdc.author.id 0000-0003-0348-0575 en_US
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gdc.author.scopusid 57201675340
gdc.author.scopusid 57190064834
gdc.author.scopusid 57217604248
gdc.author.scopusid 8516383700
gdc.bip.impulseclass C5
gdc.bip.influenceclass C5
gdc.bip.popularityclass C5
gdc.coar.type text::journal::journal article
gdc.collaboration.industrial false
gdc.description.department İzmir Institute of Technology. Chemistry en_US
gdc.description.department İzmir Institute of Technology. Bioengineering en_US
gdc.description.publicationcategory Makale - Uluslararası Hakemli Dergi - Kurum Öğretim Elemanı en_US
gdc.description.scopusquality Q2
gdc.description.volume 24
gdc.description.wosquality Q2
gdc.identifier.openalex W4389836913
gdc.identifier.pmid 38102867
gdc.identifier.wos WOS:001139640200001
gdc.index.type WoS
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gdc.index.type PubMed
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gdc.oaire.impulse 1.0
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gdc.oaire.keywords Semiconductors
gdc.oaire.keywords Polymers
gdc.oaire.keywords Quantum Dots
gdc.oaire.keywords Solvents
gdc.oaire.keywords Polyelectrolytes
gdc.oaire.keywords Fluorescent Dyes
gdc.oaire.popularity 3.92001E-9
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gdc.openalex.collaboration International
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