WoS İndeksli Yayınlar Koleksiyonu / WoS Indexed Publications Collection
Permanent URI for this collectionhttps://hdl.handle.net/11147/7150
Browse
21 results
Search Results
Article Citation - WoS: 2Citation - Scopus: 2Identification of Novel Arsenic Resistance Genes in Yeast(Wiley, 2022) Işık, Esin; Balkan, Çiğdem; Karl, Vivien; Karakaya, Hüseyin Çağlar; Hua, Sansan; Rauch, Sebastien; Tamás, Markus J; Koç, AhmetArsenic is a toxic metalloid that affects human health by causing numerous diseases and by being used in the treatment of acute promyelocytic leukemia. Saccharomyces cerevisiae (budding yeast) has been extensively utilized to elucidate the molecular mechanisms underlying arsenic toxicity and resistance in eukaryotes. In this study, we applied a genomic DNA overexpression strategy to identify yeast genes that provide arsenic resistance in wild-type and arsenic-sensitive S. cerevisiae cells. In addition to known arsenic-related genes, our genetic screen revealed novel genes, including PHO86, VBA3, UGP1, and TUL1, whose overexpression conferred resistance. To gain insights into possible resistance mechanisms, we addressed the contribution of these genes to cell growth, intracellular arsenic, and protein aggregation during arsenate exposure. Overexpression of PHO86 resulted in higher cellular arsenic levels but no additional effect on protein aggregation, indicating that these cells efficiently protect their intracellular environment. VBA3 overexpression caused resistance despite higher intracellular arsenic and protein aggregation levels. Overexpression of UGP1 led to lower intracellular arsenic and protein aggregation levels while TUL1 overexpression had no impact on intracellular arsenic or protein aggregation levels. Thus, the identified genes appear to confer arsenic resistance through distinct mechanisms but the molecular details remain to be elucidated.Article Citation - WoS: 9Citation - Scopus: 9How Does Arsenic Speciation (arsenite and Arsenate) in Groundwater Affect the Performance of an Aerated Electrocoagulation Reactor and Human Health Risk?(Elsevier, 2022) Gören, Ayşegül Yağmur; Kobya, Mehmet; Khataee, AlirezaArsenic (As) occurrence in water resources has become one of the most critical environmental problems worldwide. The detrimental health impacts on humans have been reported due to the consumption of As-contaminated groundwater resources. Consumption of As-containing water over the long term can cause arsenicosis and chronic effects on human health due to its toxicity. Several treatment processes are available for As removals such as coagulation, ion exchange, adsorption, and membrane technologies but they have various major drawbacks. In the present work, therefore, an aerated electrocoagulation (EC) system with aluminum anodes was operated for simultaneous arsenate (As(V)) and arsenite (As(III)) removal to overcome the disadvantages of other processes such as, sludge formation, difficulties in operation, high operating costs, high energy consumption, and the requirement of pre-treatment process and to enhance the conventional EC process. The combined effects of the applied current (0.075–0.3 A), aeration rate (0–6 L/min), pH (6.5–8.5), and As speciation (As(V)-As(III)) were studied on As removal efficiency. The findings revealed that As removal mostly depended on the airflow rate and the applied current in the EC system. The highest As removal efficiency (99.1%) was obtained at an airflow rate of 6 L/min, a pH of 6.5, an initial As (V) concentration of 200 μg/L, and a current of 0.3 A, with an energy consumption of 2.85 kWh/m3 and an operating cost of 0.66 $/m3. The human health risk assessment of treated water was also examined to understand the performance of the EC system. At most of the experimental runs, the chronic toxic risk (CTR) and carcinogenic risk (CR) of As were within the permissible limits except for an airflow rate of 0–2 L/min, an initial pH of 8.5, and a current of 0.075–0.15 A for high initial As (III) concentrations. Overall, the As removal performance and groundwater risk assessment show that the EC process is a promising option for industrial applications.Article Citation - WoS: 32Citation - Scopus: 35Distribution of Geothermal Arsenic in Relation To Geothermal Play Types: a Global Review and Case Study From the Anatolian Plate (turkey)(Elsevier, 2021) Baba, Alper; Uzelli, Taygun; Sözbilir, HasanArsenic has a natural cycle as it travels underground. It can mix with geothermal fluid in different ways under the control of magmatic and tectonic processes. Geogenic arsenic is present in many geothermal fields in the world at concentrations above the limits set for human health. The arsenic content of geothermal fluids is also related to the concept of geothermal play type, which forms geothermal systems, because the natural processes that form the geothermal system also control the arsenic cycle. In this study, an attempt is made to explain the relationship between the geothermal play type concept and geothermal arsenic circulation. For this purpose, geothermal field examples are given from around the world and Turkey. The result shows that arsenic concentrations can reach significant levels along with plate tectonic boundaries in the world. When arsenic concentrations were evaluated, the effect of major faults on the Anatolian Plate was clearly seen. Also, in the Anatolian plate where volcanosedimentary units are common, geothermal fluids caused more effective alteration along with structural control and increased arsenic concentrations in geothermal systems. This interaction between structural elements, geothermal fluid, and the arsenic cycle shows that the concept of play type in geothermal systems should also be taken into consideration. It was determined that the places with high arsenic values are located within the convective-non-magmatic extensional geothermal play types such as Western Anatolian Extensional System and the North Anatolian Fault. The concept of play type in geothermal systems includes all systematic and external factors that make up these processes. For this reason, it is very important to evaluate the play type classification together with the arsenic cycle.Article Citation - WoS: 58Citation - Scopus: 59Assessment of Different Nanofiltration and Reverse Osmosis Membranes for Simultaneous Removal of Arsenic and Boron From Spent Geothermal Water(Elsevier, 2021) Jarma, Yakubu A.; Karaoğlu, Aslı; Tekin, Özge; Baba, Alper; Ökten, H.Eser; Tomaszewska, Barbara; Kabay, NalanOne of the factors that determine agricultural crops’ yield is the quality of water used during irrigation. In this study, we assessed the usability of spent geothermal water for agricultural irrigation after membrane treatment. Preliminary membrane tests were conducted on a laboratory-scale set up followed by mini-pilot scale tests in a geothermal heating center. In part I, three commercially available membranes (XLE BWRO, NF90, and Osmonics CK- NF) were tested using a cross-flow flat-sheet membrane testing unit (Sepa CF II, GE-Osmonics) under constant applied pressure of 20 bar. In part II, different spiral wound membranes (TR-NE90-NF, TR-BE-BW, and BW30) other than the ones used in laboratory tests were employed for the mini-pilot scale studies in a continuous mode. Water recovery and applied pressure were maintained constant at 60% and 12 bar, respectively. Performances of the membranes were assessed in terms of the permeate flux, boron and arsenic removals. In laboratory tests, the permeate fluxes were measured as 94.3, 87.9, and 64.3 L m?2 h?1 for XLE BWRO, CK-NF and NF90 membranes, respectively. The arsenic removals were found as 99.0%, 87.5% and 83.6% while the boron removals were 56.8%, 54.2%, and 26.1% for XLE BWRO, NF90 and CK-NF membranes, respectively. In field tests, permeate fluxes were 49.9, 26.8 and 24.0 L m?2 h?1 for TR-NE90-NF, BW30-RO and TR-BE-BW membranes, respectively. Boron removals were calculated as 49.9%, 44.1% and 40.7% for TR-BE-BW, TR-NE90-NF and BW30-RO membranes, respectively. Removal efficiencies of arsenic in mini-pilot scale membrane tests were all over 90%. Quality of the permeate water produced was suitable for irrigation in terms of the electrical conductivity (EC) and the total dissolved solids (TDS) for all tested membranes with respect to guidelines set by the Turkish Ministry of Environment and Urbanisation (TMEU). However, XLE BWRO, CK-NF and NF90 membranes failed to meet the required limits for irrigation in terms of boron and arsenic concentrations in the product water. The permeate streams of TR-BE-BW, TR-NE90-NF and BW30-RO membranes complied with the irrigation water standards in terms of EC, TDS and arsenic concentration while boron concentration remained above the allowable limit. © 2020 Elsevier B.V.Article Citation - WoS: 2Citation - Scopus: 2A Deterministic and Stochastic Assessment for Exposure and Risk of Arsenic Via Ingestion of Edible Crops(Springer Verlag, 2019) Can Terzi, Begüm; Gündüz, Orhan; Sofuoğlu, Sait CemilNatural arsenic contamination is a critical problem for various places around the world. Simav Plain (Kutahya, Turkey) is one such area that was shown to have natural arsenic contamination in its waters and soils. Arsenic exposure through ingestion of edible crops cultivated in Simav Plain and associated health risks were assessed in this study. To achieve this objective, arsenic levels in 18 crop species were estimated based on measured soil arsenic concentrations. Individual and aggregate non-carcinogenic and carcinogenic risks associated with ingestion of arsenic-contaminated crops were then assessed with scenario-based deterministic point estimates and stochastic population estimates. Monte Carlo simulation was used for the estimation of population health risks. Accordingly, wheat was found as the highest-ranked crop specie for the both types of health risks, followed by tomato and potato, which are three of the most consumed crops in the region. The risk levels estimated in this study were relatively high, indicating consumption of crops grown in the plain may be posing significant health risks even at lower-bound estimates. Consuming wheat, tomato, potato, and their products from uncontaminated sources was found to reduce the aggregate risks up to 88% implicating the importance of proposing suitable management measures for similar risk-prone areas.Article Citation - WoS: 2Citation - Scopus: 3Determination of Arsenic by Hydride Generation—laser-Induced Breakdown Spectroscopy: Characterization of Interelement Interferences(Taylor and Francis Ltd., 2018) Bölek, Deniz; Ünal Yeşiller, Semira; Yalçın, ŞerifeIn this study, interelement interferences were evaluated for the determination of arsenic in aqueous samples through laser-induced breakdown spectroscopy (LIBS) hyphenated with a hydride generation sample introduction system. Optimum instrumental and chemical parameters were selected and variation in LIBS signal intensity was recorded for As solution in the presence of comparable concentrations of interfering elements. No significant change in the signal intensity of As(I) 228.8 nm line was observed in the presence of alkali/alkali earth metals; however, the presence of hydride-forming elements has shown a noticeable decrease in the line emission strength of arsenic. The least variation in arsenic signal was observed in the presence of Ge, the most volatile of all. However, the signal has decreased to a greater extent in the presence of Sn, Sb, and Pb. The presence of interfering elements on electron temperature and electron number density of arsenic plasma has also been studied. Plasma temperatures calculated using both As and Ar emission lines in the Boltzmann equation were similar, being around 5000 K. The McWhirter criterion for stationary and homogenous plasmas was utilized for the establishment of the local thermodynamic equilibrium under the plasma conditions studied. Applicability of the technique for multielemental analysis of water samples was tested through spiking experiments. Arsenic signal showed 26% decrease in the multielemental mixture solution. LIBS is among a few atomic spectroscopic techniques that facilitate rapid and simultaneous multielemental analysis without extensive sample preparation steps. However, the analytical performance of the technique still requires more serious efforts to compete with other conventional techniques for routine analysis of environmental samples.Conference Object Citation - WoS: 2Citation - Scopus: 2Arsenic in Groundwater in Western Anatolia, Turkey: a Review(University of Silesia Press, 2010) Gündüz, Orhan; Baba, Alper; Elpit, HandanOccurrence of arsenic (As) in groundwater has been a major problem worldwide for the last hundred years. Considering its toxic effects on human health, the presence of elevated levels of arsenic in groundwater resources used in drinking water supply has been an active research field throughout the world (Van Halem et al., 2009). In this regard, case studies from Bangla-desh, India, Nepal, El Salvador, Ecuador, Honduras, Mexico, Chile, China, Canada, Argentina, Peru, Taiwan, United States, Bolivia and Turkey have been documented with regards to the detection of natural levels in groundwater, the occurrence and distribution mechanisms, the human health effects and the in-situ and ex-situ treatment techniques (Jean et al., 2010). In many of these locations, arsenic is naturally found in the subsurface strata within volcanic and sedimentary formations as well as in areas of geothermal systems related to tectonic activity. Western Anatolia in Turkey is one such area of complex geology with active tectonics and high geothermal potential. This natural setting serves as a suitable environment for the presence of high levels of arsenic in subsurface waters. Based on these fundamentals, this study presents a general overview of arsenic presence in western Anatolia.Conference Object Occurrence of Arsenic and Related Microbial Signature of Hydrothermal Systems in Western Turkey(Taylor & Francis, 2012) Chen, Chienyen; Maity, Jyoti Prakash; Bundschuh, Jochen; Bhattacharya, Prosun; Baba, Alper; Gündüz, OrhanThe naturally occurring aqueous Arsenic (As) and other toxic elements are found around the world. The present study concentrates on arsenic concentrations, speciation and related microbial diversity in a hydrothermal system in Western Turkey. The surface temperatures of hot springs reach up to 90°C and deep well (reservoir) temperatures vary in the range of 40 to 230°C. The elements such as As, B, Br, Ba, Cr, Fe, Mn, V and Zn are found in high concentration in hydrothermal waters. Hydrogeochemically, Seferihisar hot spring exhibited a Na-Cl water type. On the other hand, Karahayit, Pamukkale, Emirfaki, Alaşehir and Sart exhibit a Ca-HCO 3 water type and Çitgöl exhibited a Na-HCO 3-SO 4 water type. The arsenic (As) concentrations in geothermal waters of Western Anatolia have been detected to range from 0.03 mg/L to 1.5 mg/L, including Buharkent (İnalti) (1.50 ± 0.005 mg/L), Kizildere (1.13 ± 0.005 mg/L), Eynal (0.71 ± 0.005 mg/L) and Sarayköy (0.06 ± 0.004 mg/L). Arsenic (III) is the dominant species in geothermal water of Western Anatolia. The 16S rRNA gene sequences of bacterial diversity show that the thermophilic, sulfur/thiosulfate-oxidizing bacterium (Thiobacter subterraneus) is present in Kula geothermal water and mesophilic sulfur- and thiosulfate-oxidizing Sulfurovum lithotrophicum bacterium occurs in Sarayköy geothermal spring. Also, Bacillus fumarioli, (a thermophilic, aerobic endospore forming bacterium growing on (NH 4) 2 SO 4, MgSO 4 and MnSO 4 at 50-55°C), Schlegelella thermodepolymerans and Methylocaldum szegediense are rich in geothermal water.Article Citation - WoS: 18Citation - Scopus: 22The Health Risk Associated With Chronic Diseases in Villages With High Arsenic Levels in Drinking Water Supplies(Springer Verlag, 2017) Gündüz, Orhan; Bakar, Coşkun; Şimşek, Celalettin; Baba, Alper; Elçi, Alper; Gürleyük, Hakan; Mutlu, Merdiye; Çakır, AyşeThis study is intended to compare and assess the distribution and possible causes of current chronic diseases in villages with high arsenic levels in drinking water supplies. It is a cross-sectional epidemiological research that analyzes the frequency and underlying risk factors of chronic diseases in villages with varying levels of arsenic exposure through drinking water. Sample space of study included 1003 individuals, 614 of whom were from villages with high arsenic levels in drinking water and remaining 389 were from two control villages with below-limit arsenic levels in drinking water. While nutritional habits and living environments of two groups were similar, cigarette smoking and alcohol use were higher in villages with low arsenic levels. Mini mental state examination test results in 60+ age group were lower in villages with high arsenic levels. Although no statistically significant differences were detected in chronic disease occurrence between the groups, the number of cases was higher in villages with higher percentage of cigarette smoking and alcohol use. Moreover, cases of lung, colon, and stomach cancers were higher in villages with high arsenic levels in drinking water supplies.Article Citation - WoS: 39Citation - Scopus: 47Quality of Groundwater Resources in Afghanistan(Springer Verlag, 2017) Hayat, Ehsanullah; Baba, AlperWater is the main source of energy production and economy in Afghanistan where agriculture accounts for more than 50% of the country’s gross domestic product (GDP). Access to safe drinking water is still a problem in the country, which has caused different health issues and even child mortality especially in rural areas. Groundwater is the main source of drinking water in the country. However, little knowledge is available about the quality of groundwater throughout the entire country, and its quality has not been investigated extensively yet like in other countries in the world. While most people think that consuming groundwater is a reliable and safe source of drinking water for health, the United Nations (UN) agencies report various kinds of waterborne diseases and even child mortalities due to drinking water quality in the country. In this article, significant geogenic and anthropogenic factors that play a vital role in groundwater contamination of the country are identified and explained. Different geogenic contaminations such as arsenic, fluoride, sulfate, and boron occur in several areas of Afghanistan that have a direct effect on human health. The water quality mapping for Afghanistan is completed for half of the country, which shows that groundwater is plagued by high levels of fluoride and arsenic in some areas. The water quality mapping of the other half of the country cannot be completed due to security concerns currently. Also, there are different kinds of waterborne diseases such as diarrhea, cholera, and dysentery that can be seen in different parts of the country because of anthropogenic activities which continuously deteriorate groundwater.
- «
- 1 (current)
- 2
- 3
- »