Chemistry / Kimya

Permanent URI for this collectionhttps://hdl.handle.net/11147/4072

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End date: 2019Institution Author: search.filters.institutionAuthor.Özçelik, Serdar

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Now showing 1 - 10 of 28
  • Article
    Citation - WoS: 6
    Citation - Scopus: 8
    Enhanced Spontaneous Emission Rate in a Low-Q Hybrid Photonic-Plasmonic Nanoresonator
    (American Chemical Society, 2019) Gökbulut, Belkıs; İnanç, Arda; Topçu, Gökhan; Ünlütürk, Seçil Sevim; Özçelik, Serdar; Demir, Mustafa Muammer; İnci, Mehmet Naci
    In this paper, CdTe quantum dots (QDs)-doped single electrospun polymer nanofibers are partially coated with gold nanoparticles to form distinct hybrid photonic-plasmonic nanoresonators to investigate the critical role of the cavity-confined hybrid mode on the modification of the spontaneous emission dynamics of the fluorescent emitters in low-Q photonic cavities. A total enhancement factor of 11.2 is measured via a time-resolved experimental technique, which shows that there is an increase of about three times in the spontaneous emission rate for the QDs-doped gold nanoparticle-decorated nanofibers as they are compared with those uncoated ones. The physical mechanism affecting the spontaneous emission rate of the encapsulated QDs in such a hybrid photonic-plasmonic nanoresonator is explained to be due to regeneration of the mode field in the nanofiber cavity upon the interaction of the dipoles with the surface plasmons of distinctive gold nanoparticles that surround the outer surface of the nanofiber.
  • Article
    Citation - WoS: 13
    Citation - Scopus: 13
    Single Chain Cationic Polymer Dot as a Fluorescent Probe for Cell Imaging and Selective Determination of Hepatocellular Carcinoma Cells
    (American Chemical Society, 2019) Özenler, Sezer; Yücel, Müge; Tüncel, Özge; Kaya, Hakan; Özçelik, Serdar; Yıldız, Ümit Hakan
    This letter describes formation of single chain cationic polymer dots (Pdots) made of poly[1,4-dimethy1-1-(34(2,4,5-trimethylthiophen-3-yl)oxy)propyl)piperazin-1-ium bromide] conjugated polyelectrolyte (CPE). The single chain Pdot formation relies on a simple process which is a rapid nanophase separation between CPE solution of ethylene glycol and water. Pdots show narrow monodisperse size distribution with a 3.6 nm in diameter exhibiting high brightness and excellent colloidal and optical stability. It has been demonstrated that photoluminescent Pdots provide selective nuclear translocation to hepatocellular carcinoma cells as compared to healthy liver cells. The Pdot labeling effectively discriminates cancer cells in the coculture media. Pdots hold great promise as a luminescent probe to diagnose cancer cells in histology and may guide surgeons during operations to precisely separate out cancerous tissue due to augmented fluorescence brightness.
  • Article
    Citation - WoS: 42
    Citation - Scopus: 47
    Ph Responsive Glycopolymer Nanoparticles for Targeted Delivery of Anti-Cancer Drugs
    (Royal Society of Chemistry, 2018) Yılmaz, Gökhan; Güler, Emine; Geyik, Caner; Demir, Bilal; Özkan, Melek; Odacı Demirkol, Dilek; Özçelik, Serdar; Timur, Suna; Becer, C. Remzi
    Over the past decade, there has been a great deal of interest in the integration of nanotechnology and carbohydrates. The advances in glyconanotechnology have allowed the creation of different bioactive glyconanostructures for different types of medical applications, especially for drug delivery and release systems. Therefore, the use of more efficient biocompatible nanocarriers with high loading capacity, low overall toxicity and receptor-mediated endocytosis specificity is still in focus for the enhancement of the therapeutic effect. Conjugation of sugar derivatives onto gold nanoparticles presents unique properties that include a wide array of assembling models and size-related electronic, magnetic and optical properties. Here, pH-responsive drug-conjugated glycopolymer-coated gold nanoparticles were prepared by functionalization of gold nanoparticles with thiol-terminated glycopolymers and then subsequent conjugation of doxorubicin (DOX). Among the four different glycopolymers, their drug release, physicochemical characterization (spectroscopy, particle size and surface charge) and in vitro bioapplications with four different cell lines were compared. As a result, pH-sensitive drug delivery via sugar-coated AuNPs was performed thanks to hydrazone linkages between glycopolymers and DOX. Comparative viability tests also demonstrated the efficiency of glycopolymer-DOX conjugates by fluorescence cell imaging. The obtained results reveal that AuNP homoglycopolymer DOX conjugates (P4D) have significant potential, especially in human neuroblastoma cells in comparison to cervical cancer cells and lung cancer cells.
  • Conference Object
    Citation - Scopus: 1
    Yapay Sindirim Sıvısında Doğal Zeolitlerde Meydana Gelen Morfolojik Değişmeler
    (Institute of Electrical and Electronics Engineers Inc., 2009) Demirbüker Kavak, Dilek; Özçelik, Serdar; Ülkü, Semra
    Doğal zeolitler biyoaktif maddelerdir. Doğal zeolitlerin hayvanlarda biyokütle arttırıcı besi katkı maddesi, insanlarda ülser tedavisinde mide asitliğini tamponlayıcı, asitliği düşürücü ilaç gibi değişik kullanım alanları mevcuttur. Değişik sağlık alanlarında kullanımlarından dolayı, zeolitlerin yapısal stabilitesinin sindirim sırasında belirlenmesi; olası olumlu veya olumsuz etkileşimleri anlamak açısından önem taşımaktadır. Gerçekleştirilen araştırmada, yapay sindirim sırasında zeolitte meydana gelebilecek olası morfolojik değişimlerin incelenmesi hedeflenmiştir. Bu amaçla zeolitin ABTS ile radikal sönümleme kapasitesi araştırılmış, yapay sindirim denemeleri gerçekleştirilerek de uygulama süreci sonrası yapıda olası değişimler ve adsorpsiyonlar taramalı elektron mikroskobu, FTIR, XRD analizleri ile incelenmiştir. 3g/100ml zeolitin ABTS radikalini %45 inhibe ettiği bulunmuştur. Taramalı elektron mikroskobu deneyleri sonucunda yapay sindirilmiş örneklerin yüzey morfolojisinde değişim gözlenmemiştir. Element analizleri yapısal kaybın olmadığını, Al ve Si elementlerinin ağırlıkça yüzdelerinin, kontrol örnekleriyle (Al:8.1; Si: 39) sindirilmiş örneklerde (Al:8.2; Si: 38.3) yaklaşık aynı olduğunu göstermiştir. Infrared spektrum (IR) ve X-ray ışını kırınımı analizleri sonuçları ise bu bulguları doğrulamıştır. Ayrıca taramalı elektron mikroskobu ve IR spektrum sonuçları yapay sindirim ortamındaki maddelerin, zeolit yüzeyinde adsorplanmadıklarıını göstermektedir. Sonuç olarak doğal zeolitler, yapay sindirim sırasında yapısal stabilitelerini kaybetmemektedirler.
  • Article
    Citation - Scopus: 2
    Enthalpy-Driven Selective Loading of Cdse0.75s0.25 Nanoalloys in Triblock Copolymer Polystyrene-B
    (Elsevier Ltd., 2016) Aşkın, Görkem; Çeçen, Volkan; Ünlütürk, Seçil Sevim; Özçelik, Serdar; Demir, Mustafa Muammer
    CdSe0.75S0.25 nanoalloys were blended with asymmetric triblock copolymer of polystyrene-b-polyisoprene-b-polystyrene(PS-SIS) in tetrahydrofuran. The fraction of styrene block varies from 14 to 22% with respect to isoprene by mass. The morphology of the copolymer cast film experiences a phase change from cylinder to lamella. CdSe0.75S0.25 nanoalloys were prepared by two-phase method. The surface of the nanoalloys was capped by either oleic acid (OA) or n-tri-octylphosphonic acid (TOPO) in situ. The mean diameter of the alloyed particles is around 12 nm in both systems. The chemical nature of the nanoalloy surface was found to influence the dispersion of the particles over polymer volume. The size of the nanoalloy domains in PS is 50 nm, on average, consisting of approximately 0.7 wt% nanoalloys. However, the size of the nanoalloy domains is smaller when they are loaded into PS-SIS. The structure formation is predominantly determined by enthalpic compatibilization. Atomic force microscopy results suggest that the nanoalloys capped with TOPO sequester into PS-rich domains and enlarge the domain. On the other hand, the ones capped with OA prefer to locate in polyisoprene domains. The increase of particles over 1.0 wt% distorts the lamella structure.
  • Article
    Citation - WoS: 50
    Citation - Scopus: 57
    Biofunctional Quantum Dots as Fluorescence Probe for Cell-Specific Targeting
    (Elsevier Ltd., 2014) Ağ, Didem; Bongartz, Rebecca; Eral Doğan, Leyla; Seleci, Muharrem; Walter, Johanna G.; Odacı Demirkol, Dilek; Stahl, Frank; Özçelik, Serdar; Timur, Suna; Scheper, Thomas
    We describe here the synthesis, characterization, bioconjugation, and application of water-soluble thioglycolic acid TGA-capped CdTe/CdS quantum dots (TGA-QDs) for targeted cellular imaging. Anti-human epidermal growth factor receptor 2 (HER2) antibodies were conjugated to TGA-QDs to target HER2-overexpressing cancer cells. TGA-QDs and TGA-QDs/anti-HER2 bioconjugates were characterized by fluorescence and UV-Vis spectroscopy, X-ray diffraction (XRD), hydrodynamic sizing, electron microscopy, and gel electrophoresis. TGA-QDs and TGA-QDs/anti-HER2 were incubated with cells to examine cytotoxicity, targeting efficiency, and cellular localization. The cytotoxicity of particles was measured using an MTT assay and the no observable adverse effect concentration (NOAEC), 50% inhibitory concentration (IC50), and total lethal concentration (TLC) were calculated. To evaluate localization and targeting efficiency of TGA-QDs with or without antibodies, fluorescence microscopy and flow cytometry were performed. Our results indicate that antibody-conjugated TGA-QDs are well-suited for targeted cellular imaging studies.
  • Article
    Citation - WoS: 33
    Citation - Scopus: 33
    Folic Acid Modified Clay/Polymer Nanocomposites for Selective Cell Adhesion
    (Royal Society of Chemistry, 2014) Barlas, Fırat Barış; Ağ Şeleci, Didem; Özkan, Melek; Demir, Bilal; Şeleci, Muharrem; Aydın, Muhammed; Taşdelen, M. A.; Zareie, Hadi M.; Timur, Suna; Özçelik, Serdar; Yağcı, Yusuf
    A folic acid (FA) modified poly(epsilon-caprolactone)/clay nanocomposite (PCL/MMT-(CH2CH2OH)2-FA) resulting in selective cell adhesion and proliferation was synthesized and characterized as a cell culture and biosensing platform. For this purpose, first the FA modified clay (MMT-(CH2CH2OH)2-FA) was prepared by treating the organo-modified clay, Cloisite 30B [MMT-(CH2CH 2OH)2] with FA in chloroform at 60°C. Subsequent ring opening polymerization of ε-caprolactone in the presence of tin octoate (Sn(Oct)2) using MMT-(CH2CH2OH)2-FA at 110°C resulted in the formation of MMT-(CH2CH 2OH)2-FA with an exfoliated clay structure. The structures of intermediates and the final nanocomposite were investigated in detail by FT-IR spectral analysis and DSC, TGA, XRD, SEM and AFM measurements. The combination of FA, PCL and clay provides a simple and versatile route to surfaces that allows controlled and selective cell adhesion and proliferation. FA receptor-positive HeLa and negative A549 cells were used to prove the selectivity of the modified surfaces. Both microscopy and electrochemical sensing techniques were applied to show the differences in cell adherence on the modified and pristine clay platforms. This approach is expected to be adapted into various bio-applications such as 'cell culture on chip', biosensors and design of tools for targeted diagnosis or therapy.
  • Article
    Citation - WoS: 7
    Citation - Scopus: 7
    An Ultraviolet Photodetector With an Active Layer Composed of Solution Processed Polyfluorene:zn0.71cd0.29s Hybrid Nanomaterials
    (Elsevier Ltd., 2014) Sevim, Seçil; Memişoğlu, Görkem; Varlıklı, Canan; Doğan, Leyla Eral; Taşçıoğlu, Didem; Özçelik, Serdar
    An ultraviolet photodetector with an active layer of solution processed polymer:quantum dot hybrid is introduced. Poly[9,9-di-(2-ethylhexyl)-fluorenyl- 2,7-diyl] represents the polymer and Zn0.71Cd0.29S is the quantum dot used for the device. Photophysical studies showed that an electron transfer from the polymer to the ternary quantum dot is thermodynamically favored. Quenching experiments performed between the polymer and quantum dot indicates the formation of a non-fluorescent complex with an association constant of 4.6 × 104 M-1. The device structure of ITO/PEDOT:PSS/ADS231BE: 50 wt% Zn0.71Cd0.29S/Al yielded a photoresponsivity value of 324 mA/W at -4 V under 1 mW/cm2 illumination at 365 nm at room temperature and this value is further increased to 380 mA/W as a result of annealing at 75 °C.
  • Article
    Citation - WoS: 56
    Citation - Scopus: 57
    Dynamic Nuclear Polarization of Spherical Nanoparticles
    (Royal Society of Chemistry, 2013) Akbey, Ümit; Altın, Burcu; Linden, Arne; Özçelik, Serdar; Gradzielski, Michael; Oschkinat, Hartmut
    Spherical silica nanoparticles of various particle sizes (∼10 to 100 nm), produced by a modified Stoeber method employing amino acids as catalysts, are investigated using Dynamic Nuclear Polarization (DNP) enhanced Nuclear Magnetic Resonance (NMR) spectroscopy. This study includes ultra-sensitive detection of surface-bound amino acids and their supramolecular organization in trace amounts, exploiting the increase in NMR sensitivity of up to three orders of magnitude via DNP. Moreover, the nature of the silicon nuclei on the surface and the bulk silicon nuclei in the core (sub-surface) is characterized at atomic resolution. Thereby, we obtain unique insights into the surface chemistry of these nanoparticles, which might result in improving their rational design as required for promising applications, e.g. as catalysts or imaging contrast agents. The non-covalent binding of amino acids to surfaces was determined which shows that the amino acids not just function as catalysts but become incorporated into the nanoparticles during the formation process. As a result only three distinct Q-types of silica signals were observed from surface and core regions. We observed dramatic changes of DNP enhancements as a function of particle size, and very small particles (which suit in vivo applications better) were hyperpolarized with the best efficiency. Nearly one order of magnitude larger DNP enhancement was observed for nanoparticles with 13 nm size compared to particles with 100 nm size. We determined an approximate DNP penetration-depth (∼4.2 or ∼5.7 nm) for the polarization transfer from electrons to the nuclei of the spherical nanoparticles. Faster DNP polarization buildup was observed for larger nanoparticles. Efficient hyperpolarization of such nanoparticles, as achieved in this work, can be utilized in applications such as magnetic resonance imaging (MRI).
  • Article
    Citation - WoS: 2
    Citation - Scopus: 2
    Polarized Absorption Spectra of Highly Oriented Two-Dimensional Aggregates of Tetrachlorobenzimidazolocarbocyanine in Thin Films
    (Elsevier Ltd., 2008) Özçelik, Serdar; Gülen, Demet
    Reaching a control on the mesoscopic morphology and internal molecular arrangement of cyanine aggregates is an important step for realization of devices with tailor-made optical properties. Despite a wealth of research, understanding of the relationship between molecular organization, excitonic states and dynamics of aggregates is still preliminary. To this end, we have employed polarized absorption spectroscopy to investigate the relationship between internal molecular organization and excitonic states of J-aggregates in 1,1′,3,3′tetraethyl-5,5′,6,6′-tetrachlorobenzimidazolocarbocyanine (TTBC) thin films in poly-vinyl alcohol (PVA). Angular dependence of the UV-vis spectra has been measured at 11 different orientations between the electric field polarization and the macroscopic alignment axis. Aggregate spectral response consisted of an asymmetrically split Davydov pair of bands exhibiting opposite polarization: an H-band (505 nm, Lorentzian-like, polarized along the macroscopic film axis) and a J-band (594 nm, one-dimensional J-aggregate like band shape, polarized perpendicular to the macroscopic film axis). The polarized absorption observations were found to be consistent with a herringbone model for which the internal molecular arrangement, the excited state structure and dynamics have recently been detailed by us upon interpretation of isotropic absorption data in ionic aqueous solution.