Annealing-Based Model-Free Expectation Maximisation for Multi-Colour Flow Cytometry Data Clustering
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Authors
Karaçalı, Bilge
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BRONZE
Green Open Access
Yes
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No
Abstract
This paper proposes an optimised model-free expectation maximisation method for automated clustering of high-dimensional datasets. The method is based on a recursive binary division strategy that successively divides an original dataset into distinct clusters. Each binary division is carriedout using a model-free expectation maximisation scheme that exploits the posterior probability computation capability of the quasi-supervised learningalgorithm subjected to a line-search optimisation over the reference set size parameter analogous to a simulated annealing approach. The divisions arecontinued until a division cost exceeds an adaptively determined limit. Experiment results on synthetic as well as real multi-colour flow cytometrydatasets showed that the proposed method can accurately capture the prominent clusters without requiring any prior knowledge on the number of clusters ortheir distribution models.
Description
Keywords
Clustering, Data mining, Flow cytometry data analysis, Bioinformatics, Simulated Annealing algorithm, Flow cytometry data analysis, Bioinformatics, Simulated Annealing algorithm, Data mining, Clustering
Fields of Science
0301 basic medicine, 0303 health sciences, 03 medical and health sciences
Citation
Köktürk, B. E., and Karaçalı, B. (2016). Annealing-based model-free expectation maximisation for multi-colour flow cytometry data clustering. International Journal of Data Mining and Bioinformatics, 14(1), 86-99. doi:10.1504/IJDMB.2016.073365
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OpenCitations Citation Count
N/A
Volume
14
Issue
1
Start Page
86
End Page
99
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Scopus : 1
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601
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