Annealing-Based Model-Free Expectation Maximisation for Multi-Colour Flow Cytometry Data Clustering
| dc.contributor.author | Köktürk, Başak Esin | |
| dc.contributor.author | Karaçalı, Bilge | |
| dc.coverage.doi | 10.1504/IJDMB.2016.073365 | |
| dc.date.accessioned | 2017-05-12T13:09:19Z | |
| dc.date.available | 2017-05-12T13:09:19Z | |
| dc.date.issued | 2016 | |
| dc.description.abstract | This paper proposes an optimised model-free expectation maximisation method for automated clustering of high-dimensional datasets. The method is based on a recursive binary division strategy that successively divides an original dataset into distinct clusters. Each binary division is carriedout using a model-free expectation maximisation scheme that exploits the posterior probability computation capability of the quasi-supervised learningalgorithm subjected to a line-search optimisation over the reference set size parameter analogous to a simulated annealing approach. The divisions arecontinued until a division cost exceeds an adaptively determined limit. Experiment results on synthetic as well as real multi-colour flow cytometrydatasets showed that the proposed method can accurately capture the prominent clusters without requiring any prior knowledge on the number of clusters ortheir distribution models. | en_US |
| dc.identifier.citation | Köktürk, B. E., and Karaçalı, B. (2016). Annealing-based model-free expectation maximisation for multi-colour flow cytometry data clustering. International Journal of Data Mining and Bioinformatics, 14(1), 86-99. doi:10.1504/IJDMB.2016.073365 | en_US |
| dc.identifier.doi | 10.1504/IJDMB.2016.073365 | |
| dc.identifier.doi | 10.1504/IJDMB.2016.073365 | en_US |
| dc.identifier.issn | 1748-5673 | |
| dc.identifier.issn | 1748-5681 | |
| dc.identifier.scopus | 2-s2.0-84948799051 | |
| dc.identifier.uri | http://doi.org/10.1504/IJDMB.2016.073365 | |
| dc.identifier.uri | https://hdl.handle.net/11147/5494 | |
| dc.language.iso | en | en_US |
| dc.publisher | Inderscience Enterprises Ltd. | en_US |
| dc.relation.ispartof | International Journal of Data Mining and Bioinformatics | en_US |
| dc.rights | info:eu-repo/semantics/openAccess | en_US |
| dc.subject | Clustering | en_US |
| dc.subject | Data mining | en_US |
| dc.subject | Flow cytometry data analysis | en_US |
| dc.subject | Bioinformatics | en_US |
| dc.subject | Simulated Annealing algorithm | en_US |
| dc.title | Annealing-Based Model-Free Expectation Maximisation for Multi-Colour Flow Cytometry Data Clustering | en_US |
| dc.type | Article | en_US |
| dspace.entity.type | Publication | |
| gdc.author.institutional | Köktürk, Başak Esin | |
| gdc.author.institutional | Karaçalı, Bilge | |
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| gdc.description.department | İzmir Institute of Technology. Electrical and Electronics Engineering | en_US |
| gdc.description.endpage | 99 | en_US |
| gdc.description.issue | 1 | en_US |
| gdc.description.publicationcategory | Makale - Uluslararası Hakemli Dergi - Kurum Öğretim Elemanı | en_US |
| gdc.description.scopusquality | Q4 | |
| gdc.description.startpage | 86 | en_US |
| gdc.description.volume | 14 | en_US |
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| gdc.oaire.keywords | Flow cytometry data analysis | |
| gdc.oaire.keywords | Bioinformatics | |
| gdc.oaire.keywords | Simulated Annealing algorithm | |
| gdc.oaire.keywords | Data mining | |
| gdc.oaire.keywords | Clustering | |
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