Annealing-Based Model-Free Expectation Maximisation for Multi-Colour Flow Cytometry Data Clustering

dc.contributor.author Köktürk, Başak Esin
dc.contributor.author Karaçalı, Bilge
dc.coverage.doi 10.1504/IJDMB.2016.073365
dc.date.accessioned 2017-05-12T13:09:19Z
dc.date.available 2017-05-12T13:09:19Z
dc.date.issued 2016
dc.description.abstract This paper proposes an optimised model-free expectation maximisation method for automated clustering of high-dimensional datasets. The method is based on a recursive binary division strategy that successively divides an original dataset into distinct clusters. Each binary division is carriedout using a model-free expectation maximisation scheme that exploits the posterior probability computation capability of the quasi-supervised learningalgorithm subjected to a line-search optimisation over the reference set size parameter analogous to a simulated annealing approach. The divisions arecontinued until a division cost exceeds an adaptively determined limit. Experiment results on synthetic as well as real multi-colour flow cytometrydatasets showed that the proposed method can accurately capture the prominent clusters without requiring any prior knowledge on the number of clusters ortheir distribution models. en_US
dc.identifier.citation Köktürk, B. E., and Karaçalı, B. (2016). Annealing-based model-free expectation maximisation for multi-colour flow cytometry data clustering. International Journal of Data Mining and Bioinformatics, 14(1), 86-99. doi:10.1504/IJDMB.2016.073365 en_US
dc.identifier.doi 10.1504/IJDMB.2016.073365
dc.identifier.doi 10.1504/IJDMB.2016.073365 en_US
dc.identifier.issn 1748-5673
dc.identifier.issn 1748-5681
dc.identifier.scopus 2-s2.0-84948799051
dc.identifier.uri http://doi.org/10.1504/IJDMB.2016.073365
dc.identifier.uri https://hdl.handle.net/11147/5494
dc.language.iso en en_US
dc.publisher Inderscience Enterprises Ltd. en_US
dc.relation.ispartof International Journal of Data Mining and Bioinformatics en_US
dc.rights info:eu-repo/semantics/openAccess en_US
dc.subject Clustering en_US
dc.subject Data mining en_US
dc.subject Flow cytometry data analysis en_US
dc.subject Bioinformatics en_US
dc.subject Simulated Annealing algorithm en_US
dc.title Annealing-Based Model-Free Expectation Maximisation for Multi-Colour Flow Cytometry Data Clustering en_US
dc.type Article en_US
dspace.entity.type Publication
gdc.author.institutional Köktürk, Başak Esin
gdc.author.institutional Karaçalı, Bilge
gdc.author.yokid 116500
gdc.author.yokid 11527
gdc.bip.impulseclass C5
gdc.bip.influenceclass C5
gdc.bip.popularityclass C5
gdc.coar.access open access
gdc.coar.type text::journal::journal article
gdc.collaboration.industrial false
gdc.description.department İzmir Institute of Technology. Electrical and Electronics Engineering en_US
gdc.description.endpage 99 en_US
gdc.description.issue 1 en_US
gdc.description.publicationcategory Makale - Uluslararası Hakemli Dergi - Kurum Öğretim Elemanı en_US
gdc.description.scopusquality Q4
gdc.description.startpage 86 en_US
gdc.description.volume 14 en_US
gdc.description.wosquality Q4
gdc.identifier.openalex W2201595269
gdc.identifier.wos WOS:000366136100006
gdc.index.type WoS
gdc.index.type Scopus
gdc.oaire.accesstype BRONZE
gdc.oaire.diamondjournal false
gdc.oaire.impulse 0.0
gdc.oaire.influence 2.7291776E-9
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gdc.oaire.keywords Flow cytometry data analysis
gdc.oaire.keywords Bioinformatics
gdc.oaire.keywords Simulated Annealing algorithm
gdc.oaire.keywords Data mining
gdc.oaire.keywords Clustering
gdc.oaire.popularity 1.0106895E-9
gdc.oaire.publicfunded false
gdc.oaire.sciencefields 0301 basic medicine
gdc.oaire.sciencefields 0303 health sciences
gdc.oaire.sciencefields 03 medical and health sciences
gdc.openalex.collaboration National
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